Symbiopectobacterium purcellii: K6K13_22090
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Entry
K6K13_22090 CDS
T07463
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym00300
Lysine biosynthesis
sym00470
D-Amino acid metabolism
sym01100
Metabolic pathways
sym01110
Biosynthesis of secondary metabolites
sym01120
Microbial metabolism in diverse environments
sym01230
Biosynthesis of amino acids
Module
sym_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K6K13_22090 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6K13_22090 (dapF)
Enzymes [BR:
sym01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K6K13_22090 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QZN95787
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Position
complement(4746526..4747350)
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AA seq
274 aa
AA seq
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MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHRGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRIKGLTNKREIAVSTHTGRMVLSVTDDELVRVNMGE
PDFEPQRVPFRAAKAEKTYILRANDHTVLCGVVSMGNPHCVIQVDDVDTANVDTLGPVLE
SHERFPERVNVGFMQIVDRSHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLADEVRV
SLPGGDLDIHWKGVGHPLYMTGPATHVYDGLIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgctaaaatgcacggtttgggcaatgattttatggttgtcgatgccgttaca
caaaatgtctatttctcgccggagttgatccgccgtttgtcggatcgccatcgcggggtg
gggtttgatcaactgctggtggttgagccaccctacgatcctgagctggattttcactac
cgcattttcaatgcggatggcagtgaagtggcccagtgcggtaacggcgcgcgctgtttc
gcccgtttcgtgcgaatcaaagggctgaccaacaagcgcgagattgcggtgagtacccat
accgggcgcatggtgctcagcgtcacggatgatgagctggtgcgggtgaacatgggcgag
ccggattttgaaccgcagcgcgtgccgtttcgggccgccaaagcggagaaaacctatatc
ctgcgcgctaacgatcatacggtgctgtgcggcgtggtctcaatgggcaacccccactgt
gtgattcaggttgacgatgttgataccgccaatgtggacacccttggcccggtgctggaa
agccacgagcgttttcctgagcgcgtcaacgtcgggtttatgcagattgttgatcgtagc
cacatacgccttcgggtatatgagcgcggcgcgggtgaaacgcaggcctgtggcagcggt
gcctgtgccgccgtggcggtgggcattcagcaaggactattggcggatgaggttcgcgtc
tcgttaccggggggcgatctggatatccattggaaaggagtcgggcatccgctttatatg
accggtcctgccacccatgtctatgatggacttattcatttatga
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