Synechocystis sp. PCC 6803: slr6102
Help
Entry
slr6102 CDS
T00004
Name
(GenBank) type I restriction-modification system R subunit
Organism
syn
Synechocystis sp. PCC 6803
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWI2_SNF2
HSDR_N
ResIII
T1RH-like_C
DUF2066
Globin
FAA_hydro_N_2
Motif
Other DBs
NCBI-ProteinID:
BAD02159
CyanoBase:
slr6102
UniProt:
Q6YRQ2
LinkDB
All DBs
Position
pSYSX:94710..97901
Genome browser
AA seq
1063 aa
AA seq
DB search
MSRIMKSSPEYLYSEKPTLDELKKLGWQYVPGCLEDQPVPTDPLITERESFKQILIKPRL
QQALKRINLTDDGEPWLDDYQIESAISQLERAVTTEKLIEANQLITELLWNGVTVFVPNG
KDEIVQFIDFENIEQNDFLAINQYRVDPPSSNGKHFSIPDIVLFVNGIPLVVMECKSPTL
QNPLTDAIEDLLKYSNQRNSEQPEGIEKLFHYNLMMVAMSQNRAVVGAVCAKHDEYLAWK
DVYPATPESIAQIFAVEKLIGDRQTLVAGLLKPDIVLDVLRNFTMFSTHTGKLEKVLPRY
LQYRAILKAIDRLQNNSTRQDHSDDRRGGIVWHTQGSGKSLSMVYLIRKIRRTPNLKRFK
IVIVTDRTDLEKQLSATVKLTKEPLQIAKNVKQLEHYLAQPGAGLVFGMVQKFRGEDEEP
QDIEEYIPEHLNDSPEILVMIDEAHRSHASALHMNLMKALPNCAKIGFTGTPIVAAKKKK
TAEIFGGWIDKYTIKESQEDGVTLRIMYEGLEARATVANGETLDQLFEVIFRDKSEEERG
KIKQKYATRGEVGEAKELIVAKAKDMLQHYIRHILPNGFKAQVVASSRRAAIRYHEAFSL
ALQEVIQKVENQRAILQSLDDEAIASLDQETQYLAYCSRHLEILRTLETAVVISGDKEDP
QDWQCWTSQSNQDQFIERFKKPLAEDGLAFLIVKSMLLTGFNAPIEQAMYIDRNMVEHEL
LQAIARVNRTYDGKDYGLIVDYHGIRIDEALAMYDVEDLIDSHFDISTELPKLEDQCRRV
LSIFEESQTDISDVEACLQLLDDERLRVQFIESLKVFLETLDLILPRPAAAPYIPIAKKL
GLIRKSLADLYRDEHLDLVGARAKVRELIDSYIQTQGIDPKTPPVDILSLEFQQQVNQRQ
STRTQAAEMEHAARHHISVHFDEDPVYYKNLSEHLEEILQKYSDNWDERAAALEKYTQNI
QNGRQENGTGLDPQREQPFFDLLQQQTNIDQAPLIEVTREILTHIIATISRINFWNNPVA
QNNLKTWIVNYLDDQDIVSFEQQEAIADQLVQLAKKRHQWLVR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaggattatgaaatcaagccctgaatatctttattctgaaaaacctaccctagat
gaattaaaaaaacttggctggcaatatgttcctggctgtttggaagatcaacctgttcct
actgatccactgattactgaacgggaaagttttaagcagattcttattaagccccgactt
cagcaagcccttaagcgcattaatctgactgatgatggagagccatggctagatgactac
caaattgagtcggccatttcccagctagagcgggctgtcaccaccgaaaagctgatcgaa
gccaatcaactcatcacagaactgctctggaatggtgtgactgtattcgttcccaatggt
aaagatgaaattgttcagttcattgatttcgagaatattgagcagaatgatttccttgcc
atcaatcaatatcgagttgatccccccagctctaacggtaaacatttctcaattccggat
attgtcttatttgtcaatggtatccctctagtggtgatggagtgtaaaagcccaacacta
caaaatcctctcactgatgccattgaggatttactgaaatattccaaccaacgcaacagt
gaacagcccgagggcatagaaaagctattccattacaacttaatgatggtggcaatgtcc
caaaaccgggccgtagtgggagcagtgtgtgcgaaacatgatgaatatttagcttggaaa
gatgtttatcccgccacccccgaatccattgcccagatttttgcagtcgagaaacttatc
ggtgaccgtcagactttggtggccggactcctcaaacctgacattgtgctggatgtcctg
cggaacttcaccatgttcagcacccacaccggcaaacttgaaaaggttctaccccgttac
ctccagtaccgtgccatcctcaaggcgatcgaccgactgcaaaataattcaacccgccaa
gaccatagtgatgaccggagaggtggtattgtctggcatacccaagggtcagggaaaagc
ctctcaatggtgtatctaatccgaaaaattaggcggacaccaaacctaaaacgcttcaaa
atcgttattgtgaccgaccgcaccgacctcgaaaaacagctatcggcaaccgttaaactc
accaaagaacccttacaaattgccaaaaatgtcaaacaacttgaacattatctagcccaa
cctggagccggattagttttcggcatggttcaaaaattccggggtgaagatgaagaacct
caggacatcgaagaatatatacccgaacatctcaacgattccccagaaatcttggtgatg
attgacgaggctcatcgctcccatgccagtgctctccacatgaatttgatgaaggcatta
cccaactgcgccaagattggttttaccgggactcccattgttgcggcgaaaaagaaaaag
accgccgagatttttggcggctggattgataaatatacgattaaagaatctcaagaagat
ggcgttaccctacgcatcatgtacgaaggcttagaagccagagctacagttgccaatgga
gaaacattggatcagctttttgaggttatttttcgggataaatctgaagaagagcggggt
aaaatcaaacaaaaatatgcaacccgtggggaagttggtgaagcaaaggaactgattgtg
gcaaaggcaaaagatatgctgcaacactacattcgtcatattttgcccaatggttttaaa
gcccaagtcgttgcttccagccgtcgggccgccatccgttaccatgaagctttttctctc
gctctacaggaagtaattcagaaagtagagaatcagcgggcaattctccaaagccttgat
gatgaggcgatcgccagtctcgatcaggaaacccaatatttagcctattgctctcgtcat
ctcgaaatactccgcaccttagaaaccgctgttgttatttcgggcgataaagaagatcct
caagattggcaatgctggacaagtcagagtaatcaagatcagttcattgaacgtttcaaa
aaaccattggccgaagatggcctagcttttctaattgtaaaaagtatgttgctgacgggc
tttaatgcccccatcgaacaggcaatgtacatagaccgcaatatggtcgagcacgaactc
cttcaggcgatcgcccgtgtgaaccgcacctatgacgggaaagattacggtttaatcgtt
gattaccatggcatcagaattgatgaagcccttgctatgtatgacgtggaggatttaatt
gattcccattttgacatttcgacagaactacccaaactcgaagatcaatgcagacgagtc
ctatccatttttgaagaatcccaaactgatataagtgacgttgaagcctgtttacaattg
ctcgatgatgaacgactaagggttcaatttatcgagtctctaaaggtatttcttgaaacc
cttgaccttattttgccccgaccggccgctgccccctatatccccattgctaaaaaatta
ggtctaattcgtaaatcattagcagatctttatcgtgatgaacatcttgatttagtcggt
gcgagagcaaaagttagagaattaattgatagttacatccaaactcaaggcattgacccc
aaaaccccccctgttgatattctttcccttgaatttcaacaacaagttaaccagcgtcaa
tccacaagaacccaagcggcggaaatggaacatgctgcccgtcaccatatttcagtccat
tttgatgaagatcccgtttattacaaaaatttgagcgaacatcttgaggaaatcctgcaa
aaatactcagataattgggatgaaagagccgcagcccttgagaaatatactcaaaatatc
caaaacggcagacaagagaatggcacaggcttagatccccagagggaacagccctttttt
gatctgctccaacaacagactaatattgatcaagctccactcattgaagtgaccagagaa
attcttacccacattatcgctaccattagccgcatcaacttctggaacaatcctgttgcc
cagaataatctcaaaacttggattgtaaattatttggatgatcaagatattgtctccttt
gaacaacaagaggcgatcgccgatcaattggtgcaacttgctaaaaagcgtcatcaatgg
ttagtacgatga
DBGET
integrated database retrieval system
