Synechococcus sp. CB0101: CB0101_08645
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Entry
CB0101_08645 CDS
T06409
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sync
Synechococcus sp. CB0101
Pathway
sync03030
DNA replication
sync03430
Mismatch repair
sync03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CB0101_08645 (holA)
03430 Mismatch repair
CB0101_08645 (holA)
03440 Homologous recombination
CB0101_08645 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sync03032
]
CB0101_08645 (holA)
03400 DNA repair and recombination proteins [BR:
sync03400
]
CB0101_08645 (holA)
Enzymes [BR:
sync01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CB0101_08645 (holA)
DNA replication proteins [BR:
sync03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CB0101_08645 (holA)
DNA repair and recombination proteins [BR:
sync03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CB0101_08645 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
PhnG
SMC_ScpB
Motif
Other DBs
NCBI-ProteinID:
QCH14986
UniProt:
A0A4P7ZU23
LinkDB
All DBs
Position
complement(1619300..1620277)
Genome browser
AA seq
325 aa
AA seq
DB search
MPIHLLWGDDEAARTRAVDTLIREHTDPAWQSINLARLDGNDTSQATQALEEARTPPFGG
GDRVVVLQRSPFCNQCPAELAEQLEASLALIPDNCHLLLVNSGKPDGRLRTTKALQKLVK
AGEAKEQSFQLPAVWDGAGQVELVQRTARELGLQLEPAAAEALSEAIGSDSARLASELEK
LALYVGAQAITTAAVEALVGSHATNALQVGDALLAGKPAEAVALVDALLEANEPALRIVA
TLCGQIRGWLWVSLLDQQGESDVNAIAKAAGIGNPKRIYVMRKQIRGRQPARFLALLRQL
LEVEAALKRGSDPGDAFRDGFLLTS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccatttgctctggggcgacgacgaagcagcccgcacccgggcggtggacacc
cttatccgtgagcacaccgatccggcctggcagagcatcaacttggcccgcctcgatggc
aacgacaccagccaggccacgcaagccctcgaagaggcgcgcacaccacccttcggcggc
ggcgatcgagtggtggtgctgcagcgcagtcccttctgcaaccagtgcccagctgagctg
gcggagcagctggaggcctcactggccctgatccccgacaactgccatctgctgctggtg
aacagtggcaaaccggatggccgcctgcgcaccaccaaagcgctgcagaagctcgtcaag
gctggcgaagccaaggagcaaagctttcagctgccggccgtgtgggatggcgccggccag
gtggagctggttcagcgcaccgcccgggagttggggctgcagctcgagccagcagcggcc
gaagccctcagcgaagcgatcggcagcgacagcgcccgcctggcgagcgagctggagaag
ctggccctctatgtgggcgcacaagcgatcaccaccgcggccgtcgaagccctggtgggc
agccacgccaccaacgccctccaggtgggcgatgccctgctcgccggcaagcccgccgaa
gccgtggccttggtggatgccctgctggaggccaatgagccagcgctgcggatcgtggcc
accctttgtgggcagatccgcggctggctgtgggtgagcctgctggatcaacagggcgaa
agcgatgtgaatgccatcgccaaggccgccggcattggcaaccccaaacgcatctatgtg
atgcgcaaacagattcgcggccgtcagccggcccggttcctggccttgctgcggcaactg
ctggaggtggaagccgccctcaaacgcggcagcgatccgggcgatgccttccgggatggc
ttcctgctcacgagctga
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