Synechococcus sp. KORDI-52: KR52_03440
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Entry
KR52_03440 CDS
T03346
Symbol
gatB
Name
(GenBank) glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd00970
Aminoacyl-tRNA biosynthesis
synd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KR52_03440 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
synd03029
]
KR52_03440 (gatB)
Enzymes [BR:
synd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
KR52_03440 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
KR52_03440 (gatB)
Mitochondrial biogenesis [BR:
synd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KR52_03440 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AII48211
UniProt:
A0A076HFJ8
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All DBs
Position
662846..664327
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AA seq
493 aa
AA seq
DB search
MADAATQPAWEAVIGLETHVQLGTDSKIFTSASTTFGDDPNTHIDPVVCGLPGTLPVLNQ
KVLEYAVKAAMALNLNIAEHSKFDRKQYFYPDLPKNYQISQYDQPIAEEGWIEVEVAEKG
KDTYLKTIGIERLHMEEDAGKLVHAGSDRLAGSTHSLVDYNRAGVALAEIVSKPDLRTGR
EAAEYASEIRRIMRYLGVSDGNMQEGSLRCDVNISVRRGPDAPFGTKVEIKNMNSFSAIQ
RACEYEIKRQIKAYETGEPIVQETRLWDEGKQLTKSMRSKEGASDYRYFPDPDLGPIEVS
ADQRESWRAELPELPAAKRHRYADDLGLSQYDARVLTDERPMADYFEAAVNAGADPKLAA
NWITGDIAAHVNSNRFSYTELPFRPEQLAEMVQLIDGAKISGKIAKEILPELLEKGGSPK
AIVDERGLGMISDPAAIEAIVDELLGAHPDEVEAFRGGKTKLQGFFVGQLMKKTGGKADP
KLANQILSKKLKG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcagcaacccaaccggcctgggaggccgtgatcggtcttgagacccacgtg
cagctgggaacggacagcaaaattttcacttcggcgtcgaccaccttcggcgatgatccc
aacactcacattgatccagtggtgtgcggtttgcccggcacgttgccggtgttgaaccag
aaggtgctcgaatatgcggtgaaagccgcgatggccctgaatctcaacatcgccgaacac
agcaagttcgaccgcaagcagtacttctaccccgatcttccgaagaactatcaaatctct
cagtacgaccagccgatcgctgaggagggatggattgaggtggaggtcgctgaaaaggga
aaagacacttacctgaagaccatcggcatcgagcgtctgcacatggaggaagatgccggc
aagttggtgcacgccggtagcgaccgcctggcgggatccacccattccctggtggattac
aaccgtgccggtgtggccttggcggagatcgtcagcaagccggacctgcgcaccggtcgc
gaggccgcggaatatgcttcggagattcgcaggatcatgcgttacctgggtgtgagcgac
ggcaacatgcaggagggatccctgcgttgcgacgtcaacatctccgtgcgacgggggccg
gatgcgcccttcggcaccaaggtggagatcaagaacatgaactccttctcggccattcaa
agggcctgcgagtacgagatcaagcgtcagatcaaggcttacgagaccggtgagccgatc
gttcaggagacccgcctctgggacgagggcaagcagctcaccaagagcatgcgaagcaag
gagggggcaagcgattaccgctacttcccggaccccgacctgggcccgattgaggtgagt
gcggatcagcgggaatcctggcgcgctgaattgcctgagctgccagcagcgaagcggcat
cgttacgccgatgatctggggttgtctcaatacgacgcacgggtgctcaccgatgagcgg
ccgatggcggattacttcgaggctgcggtgaatgctggcgctgatcccaagcttgcggcg
aactggatcaccggcgacattgctgcccatgtgaacagcaatcggttcagctacaccgaa
ctgccgttccgccctgagcagctggccgagatggtgcaactgatcgatggcgccaagatc
agcggcaaaatcgccaaagagatcctgccagagctacttgaaaaaggcggctcacccaag
gcaatcgtcgatgagcgcgggctcggcatgatcagtgatccggcggcgatcgaggcgatc
gtcgatgagctgttgggagcccatcccgatgaggtggaggcgtttcgtgggggcaagacc
aagctgcagggcttctttgtcggccagttgatgaagaagaccggtggtaaggccgacccc
aaactggccaatcaaattctgagcaagaaactcaagggttga
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