Synechococcus sp. PCC 6312: Syn6312_3284
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Entry
Syn6312_3284 CDS
T02370
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syne
Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_3284
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syn6312_3284
Archaeal homologous recombinant proteins
Syn6312_3284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
MukB
Motif
Other DBs
NCBI-ProteinID:
AFY62327
UniProt:
K9RZ46
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All DBs
Position
3205961..3208702
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AA seq
913 aa
AA seq
DB search
MEITSVVLKNFKIHQDQRFEFRPGINAICGENGAGKTSIIEAVAWVLFDYSSYNKADLIR
NGTKSAQAWVNFISSYDERPYRIQRCTTKGYEIYDPQLQQNLGLKNREDIARWLRQQLGI
TGDLALSNLFSEMIGIPQGTFTADFLKNPEGRKKVFDPILRVDDYKNAYQKALDLEKYSQ
AQLQRSQQQLALYEQQLADWDSLKQQAQALQEITTAQEQQLTQLTQHRQSLESQAQQLQT
QATRLRTLTQDYQYLQLELANIQTQLQQQNGQVTAAEAAQHLCKKHLPAYQACLELSATL
QTLEQQLQDRPQLEQQAHQIQAQQQQATIQLSQLELQLSQLTAAQTQIAVLEPLLPQQQT
LEANLQAIQLELTTLQQAEADYQELSATQAKIQNTLATLDQEITALEALRVIVTRLPELE
AHSQQLNQHQQERKLSQTVLNQLTTLATFAQTQRVELEELNTTAQAYLQAWPDSLLGKSI
VEQALSQGLSQFQDLDHQLQELTGGFRAQSDSASVEDALAQIQAQLHTARQAQLQLATLP
GKQEQQCHYQAQLAALDNQLRKIQARLAQLPDLESQAQVLREELDGLGNPRAQIKHLQQS
LGAKPQLEQAYEQQQAMIADFQDQSNKLATALNRLNQLEQQRQTYQQQYQLHQPGSQIYL
QHLNLAQQVTVLQSQLEDIQSQQTQLSEKAAVLNQELTQAQATYDPTELDRITREINQAE
SQINQLLGSLPLQQTQLTQLQTELAARSAIYDRWQEQQTESDRQIQIDQFIQTSRQIFNQ
SGPRITQYYMSSIVQVADQLFRELLNRPDVALAWTEDYEIRVQEEGHWRGFKSLSGGEQM
CGALAIRLALLKVLVEIDIAFFDEPTTNMDTQRRSQLATALGNLRSFHQLFVISHDDAFE
QMTENIIRVSRSS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaaattacctcagtcgttctcaaaaattttaagattcaccaagatcaacgctttgag
tttcggccaggaatcaatgccatttgtggtgaaaacggagccggtaaaaccagcattatt
gaagccgtggcctgggtgttgtttgattacagtagttacaacaaggcggatctaattcgg
aatggaacgaagagtgcccaggcctgggtcaattttatttctagctatgacgagcggccc
tatcggattcaacgctgtaccaccaaaggctatgaaatttatgatccacaactgcagcaa
aaccttggcttaaaaaatagggaggatattgctcgctggcttcggcaacaattggggatc
acaggggatcttgccctgagcaacttattttcggaaatgattggcattccccaaggcaca
tttaccgctgactttttgaaaaatccagaaggacgtaaaaaagtctttgacccaatttta
cgagtggatgattataaaaatgcctatcaaaaggctcttgatctcgaaaagtatagccag
gcccagttacaacgcagccagcaacagttggccctctatgaacaacaattagcggattgg
gacagcctcaaacaacaagcccaggccttacaggaaataacgactgcccaagagcagcaa
ctcacccaattgacccaacatcggcaaagcctagaaagccaagctcaacaactccaaacc
caggccacacgtctgcgaaccctcacccaagactatcaatatctgcaactagaactggct
aatatccaaacccaactccagcagcaaaacggccaagttaccgccgccgaagccgcccaa
cacctctgcaaaaaacacctcccggcttaccaggcctgccttgaactgagcgcaaccttg
caaaccctagagcaacaactccaagaccggccccaactagaacaacaagcccaccagatc
caggcccaacagcagcaagccaccatccaactcagccaactggaactacaactcagccaa
ctcacggcggcccagactcaaattgcagtgttagaaccgctcctgcctcagcaacaaacc
ctagaagctaacttacaggccattcaactggaactcaccacactccaacaagccgaagcg
gactaccaagaactatcagccacccaggccaaaatccaaaacaccttagccaccttagac
caagaaattaccgccttagaagccttgagagtcatcgtgactagactgcctgagcttgag
gcccattcccaacaactcaaccagcaccaacaagaacggaaactgagtcaaacggttctg
aatcagttaaccaccctagctacctttgcccaaacccaacgggtcgaactggaagagctg
aacaccaccgcccaagcctatctccaggcctggcccgactcattactggggaaaagcatt
gttgaacaagctctcagccaaggcctcagccaattccaagaccttgatcatcaactccag
gaactcaccggcggatttcgagcccaatcagactctgccagcgtggaagatgctttagcc
cagattcaagcccaactccacacagcccgccaagcccaactccaattggccactctcccc
ggcaaacaagaacaacagtgccattatcaagcccaactcgccgccctggacaaccaactg
cgaaaaatccaagcccgtctagcccaactccccgacctggaaagccaagcccaagtttta
agggaagaactagatggcctgggaaacccccgcgcccaaatcaagcatctgcaacaatcc
ttaggagcaaaaccccaattagaacaggcctacgagcagcaacaggccatgattgcggat
tttcaagatcaatctaacaaactggccactgccctaaaccgcttaaaccaactcgaacaa
caacgacaaacctatcaacagcagtatcagctccatcaacccggctcacaaatttattta
cagcacctcaacctggcccaacaggtgacagtcctccaaagccaactcgaagatatccag
tctcagcagacccaactatctgaaaaggccgccgttttgaaccaggaactaacccaggcc
caggccacctatgatccgactgaactggacaggatcactcgtgaaattaaccaggccgag
agccaaatcaatcaacttttaggcagcttacccctgcaacagacccagctcacccaactg
caaactgaactagccgcccgctctgctatctatgatcgttggcaagaacaacaaaccgag
tccgaccgccaaatccagattgatcaatttattcaaaccagtcggcaaatttttaatcaa
agtgggccgcgcatcacccaatactacatgagcagcattgtccaagtggcggatcagtta
tttcgagaattactcaatcgccctgatgtcgccctggcctggacagaagactatgaaatt
cgcgtccaagaagaaggacattggcgcggcttcaagagtttatccggtggggagcaaatg
tgtggggccctggcgattcgcttggctttgctgaaggttttagtggaaattgatattgcc
ttttttgatgagccaacaaccaatatggatacccagcgccgctctcaactggcaacggcc
ttaggtaacctgagaagttttcatcaactctttgtgattagtcatgatgatgcctttgag
cagatgacggaaaatattattcgggtcagccgttctagttag
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