Synechococcus sp. PCC 7502: Syn7502_02875
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Entry
Syn7502_02875 CDS
T02371
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
synp
Synechococcus sp. PCC 7502
Pathway
synp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syn7502_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synp03019
]
Syn7502_02875
03016 Transfer RNA biogenesis [BR:
synp03016
]
Syn7502_02875
Enzymes [BR:
synp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Syn7502_02875
Messenger RNA biogenesis [BR:
synp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Syn7502_02875
Transfer RNA biogenesis [BR:
synp03016
]
Prokaryotic type
tRNA degradation factors
Syn7502_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH_2
NRD1_2
KhpA-B_KH
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AFY74810
UniProt:
K9SXD4
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All DBs
Position
2826116..2828260
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AA seq
714 aa
AA seq
DB search
MTATEKTISFYGREIKLRIGLLAPQAGGSVLIQCGETAVLVTATRGEAREGIDFLPLMVD
YEERLYAAGRIPGGFLRREGRPPEKAILICRLIDRPMRPLFPNWIRDDIQIVATTMALDE
KSPPDVLAVTAASIAALVAGLPFNGPMAGVRVGLVGDEFIINPTYAEVEAGDLDLVVAGT
PEGIIMVEAGANQLPEQDMIEAIEFGYEAVQELIKAQQIIMAELGIAPVDLVPPPVDLTL
QSFINEQVGTKIQQVVASLEKNRTVRDAALDQIKKELKAAIANLEETDPIKLVATDKVVS
STFKEITKIYMRRQVIEDSIRIDGRKLDEVRPVSADTGILPRVHGSGLFNRGLTQVLSIA
TLGSPSDAQEMDDLHPDEKKRYLHHYNMPPYSVGEVKPMRSPGRREIGHGALAERAIVPV
LPPAQKFPYVLRVVSEVLSSNGSTSMGSVCASTLALMDAGVPITKPVSGVAMGLIQEGDQ
TRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGIAMSTIRDAIIQAKAGRMHIL
DKMMEAIPTSRLELSPYAPRLLTLQINPDQIGLVIGPGGRNIKGITEETGAKVDIQDDGT
VTISSTNGDGAKRAKILIESMTRRVSAGDVYVGKVMRIIPIGAFVEFLPGKEGMVHISQL
AEGRVGKVEDEVAVGDEVIIKIREVDQRGRYNLTRLGIHPDEAAAAKAAFESAN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaacagaaaaaacaatctcattctatggcagagagattaagttaagaattggc
ttgttggcaccacaggcaggtggatcggtattaatacaatgcggcgagactgcagttttg
gttacagccacacggggagaagcaagggaaggcatagattttttacctctaatggttgac
tatgaggagagactatatgcagcaggcagaatacccggtggatttctaagacgagaaggt
cgtccacccgaaaaggcaatcttaatttgtcggttgattgatcgccccatgcgtcctcta
tttcctaactggattcgggatgatattcagattgtagcaacaacaatggcattagatgaa
aagtctccacctgatgttttggcagtaactgcggcttcgatcgctgctttagtagctgga
ttaccctttaatggtccgatggcgggcgtgagagttggtctagtgggtgatgaatttatt
atcaatcccacctatgcagaagtggaagcaggagacctcgacctagtggttgcaggcacc
cctgaaggcatcattatggtagaagcgggagccaatcaactgccagaacaggacatgatc
gaggcgatcgaatttgggtatgaggcggtgcaagagctaatcaaagcacagcagataatt
atggcagaactgggtattgctccagtcgatttagtaccaccacccgtagatttaacccta
caaagctttattaatgagcaagttggcaccaaaattcaacaggtagtcgctagtcttgaa
aaaaatcgcaccgttagagatgccgccctcgatcaaattaaaaaagaactcaaagcggcg
atcgctaacctcgaagaaactgatccgattaagcttgtagctaccgataaagtcgtgagc
agcacttttaaagaaatcactaaaatttatatgcgccgacaggtgattgaagacagcatc
agaattgatggacgtaaactagatgaagttcgtcccgtttctgcggatacaggtattctt
ccccgtgtgcatggcagtggtttatttaatcgtggtctaactcaggtcttatccattgct
accttgggttctccttccgatgctcaagaaatggatgatctgcatcccgatgagaagaaa
agatacttgcaccactacaatatgcctccctattctgttggtgaagttaaacccatgaga
tcccccggcagaagagaaattgggcatggggctttagctgaacgggcaattgtgcctgta
ctgccacccgcccaaaagttcccctatgtgcttagagtcgtatccgaagttctatcatcc
aatggttccacatctatgggttccgtttgtgcttcgacattagctctgatggatgcaggg
gtgccaatcaccaaacccgtaagtggtgttgctatgggattaattcaagagggagatcag
actcgcatcttaacggatatacagggaattgaggatttcttgggagacatggattttaaa
gtcgcaggcaccgatactggaattacagccttacaaatggatatgaaaatcactggtatt
gccatgagtactattcgggatgcgattattcaagctaaagcaggaagaatgcacatacta
gacaaaatgatggaagcgattcctacctcaaggctagaactatcaccctatgcgccaagg
ctattaactttgcagattaaccccgatcaaattggactagtgattggacctggtggtcgt
aacatcaaaggcattaccgaagaaacaggggcaaaggttgacatccaagatgatggtact
gtaaccatttcatccactaatggtgatggagctaaacgtgccaaaatactaatcgagagt
atgactcgtcgggtcagtgcaggcgatgtctatgtcggcaaagtcatgcggataattccc
attggtgcctttgtcgaattcttgcccggcaaagaaggaatggtacatatctcgcaactg
gcagagggacgagtcgggaaagttgaagatgaagttgcggtcggcgatgaggtcattatc
aaaattcgtgaagttgaccaaaggggacgctacaatctaactcgcttaggaattcatcct
gatgaagctgctgctgctaaagccgcttttgagtctgctaattag
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