Synechococcus sp. RCC307: SynRCC307_1270
Help
Entry
SynRCC307_1270 CDS
T00523
Symbol
ddpX
Name
(GenBank) D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr01502
Vancomycin resistance
syr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SynRCC307_1270 (ddpX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SynRCC307_1270 (ddpX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syr01002
]
SynRCC307_1270 (ddpX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syr01011
]
SynRCC307_1270 (ddpX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
syr01504
]
SynRCC307_1270 (ddpX)
Enzymes [BR:
syr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
SynRCC307_1270 (ddpX)
Peptidases and inhibitors [BR:
syr01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SynRCC307_1270 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:
syr01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SynRCC307_1270 (ddpX)
Antimicrobial resistance genes [BR:
syr01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SynRCC307_1270 (ddpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
CAK28173
CyanoBase:
SynRCC307_1270
UniProt:
A5GTG4
LinkDB
All DBs
Position
complement(1126916..1127569)
Genome browser
AA seq
217 aa
AA seq
DB search
MGRPWHPIPIVDNGEPMLALPPAFLRWQPHPYQALGAPYPAGTDPFQLRQSVVERLLQVQ
QVLRDQPEPLQLLIFDAFRPLAVQQFMVDHTRAQPGVSEEQVLALWAEPSSDPTTPPPHS
TGAAVDLTLATPQGEPLEMGGDIDAVGPIGHPNHFADADPASAEGRYHQRRCLLHCAMES
AGFVRHPTEWWHFSWGDQLWAWSSEAPCAHYGRSAQA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtccctggcatccgatcccaatcgtcgacaacggtgagccgatgctggcgtta
cccccagcgttcttgcgctggcagccccacccctaccaagcccttggtgctccctatcca
gccggcactgatccgtttcagttgcgccagagcgttgtggagcgtctactacaagttcaa
caggtgttgcgggatcaacccgagccgctgcaattgctgatctttgatgccttccggccc
ctggccgtgcagcaattcatggtggatcacacccgcgcgcagcccggggtgagcgaagag
caagtgttggcgctctgggccgagccaagctctgatcccaccacaccaccgccccacagc
acgggagcggccgttgatctcaccttggccaccccccaaggcgagcccctggagatgggc
ggtgatattgatgcggtcggcccgattggtcaccccaatcactttgccgatgccgatcca
gcctctgctgaaggccgctaccaccagcggcgctgcctgttgcattgcgccatggaatca
gctggattcgttaggcaccccacggagtggtggcatttcagctggggcgatcagctctgg
gcttggagcagcgaggccccttgcgcccattacggccgcagtgctcaggcttga
DBGET
integrated database retrieval system