Synechocystis sp. PCC 6803 GT-I: SYNGTI_2405
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Entry
SYNGTI_2405 CDS
T01777
Symbol
dacB
Name
(GenBank) penicillin-binding protein 4
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
syt
Synechocystis sp. PCC 6803 GT-I
Pathway
syt00550
Peptidoglycan biosynthesis
syt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SYNGTI_2405 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syt01002
]
SYNGTI_2405 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syt01011
]
SYNGTI_2405 (dacB)
Enzymes [BR:
syt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SYNGTI_2405 (dacB)
Peptidases and inhibitors [BR:
syt01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
SYNGTI_2405 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
syt01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SYNGTI_2405 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
BAL30152
LinkDB
All DBs
Position
2672454..2673914
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AA seq
486 aa
AA seq
DB search
MALVLLSQWKKYLDPLPLQLTGTGIFYLCLTTGVGAQADRLCVGDLQQKLESHLQQPELS
RAQWGIAIQPLTDSQPIYQYQADRFFIPASNQKLITTAMALQELGPNFRFTTQVYQRDGG
KKVQVISSGDPSFDVDDLTAIAKGLKDRGVTAIEELELVDTIAPQDYQRPSWEWDDLHYG
YAPPVNGAILTGNQVILTLTPQNLGEPLTPTWSDPIAGAQWQIINQTETAVDPHQPPQVQ
QIFGQRQLVITGGLPPAGETRSITLAVADPQQYFLASLQQKLAEQGISVSTSIVSANTKA
IAPAPLLALTSPPLWTLIKTVNQDSNNLYAEALLNAIQPPSQATDWQSYVERLGLATTTV
RLRDGSGLSRQDLVTPQALVQLLINQTQKSTGTIYQQSLAVAGRSGTLERSFADTPLVGK
MRGKTGTLTGVVSLTGYVENQQWGTVAFSFMVNNSDLGASVLREAMKQMVLWTAQVEKCQ
PSDQGR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggttttgctgtctcaatggaaaaaatatctggacccattgccgctccaactg
acaggaacggggattttttacctctgtctcactacgggggtaggggcccaggccgatcgc
ctctgcgtaggggatttacaacaaaagctggaaagccatttacaacaaccagaattgagc
cgagctcaatggggcattgccattcaacctctgacagattcccagcctatttaccaatat
caggctgaccgtttttttattcccgcctccaaccaaaaattaattaccaccgccatggct
cttcaggaattggggccaaattttcgctttaccacccaagtttatcaacgggacgggggc
aaaaaagtccaagttatctccagcggcgatcccagttttgacgtagatgacctaacggcg
atcgccaagggtttaaaagataggggggtgacggcgatcgaagaattggaacttgtagat
accattgccccccaggattaccaacgccccagttgggagtgggatgatttgcactacggt
tatgctcccccggttaatggtgcaattttgactggcaatcaagtgatccttaccctcacg
ccccaaaatctgggggaaccattgacccccacctggtccgatcccattgctggggcacaa
tggcagatcattaaccagaccgaaacggccgttgatccacaccaacctccccaggtacaa
cagatttttggtcaacggcaattggttatcactggcggcctgccccccgcaggggaaacc
cgttccatcaccctagctgtggctgatccccagcaatatttcctcgccagtttgcaacaa
aagttagcagaacaaggcatttctgtaagcacttcgatcgttagcgccaacaccaaggcg
atcgccccggcccctttgctggctctcacttcccctcccctgtggacactgattaaaacc
gtcaaccaagacagcaataacctctacgctgaagcgttgctcaatgccattcagccccct
tcccaggctacggattggcagtcctacgtggaaagactaggcctagccaccaccacggtc
agattacgggatggctcaggactttcccgtcaagacctagtgacgccccaagccttagtt
caacttttaattaaccaaacccaaaaatcaacggggaccatttatcaacaatccctggcc
gttgctgggcgatcgggcaccctggaacgtagtttcgccgatactcccctggtgggcaaa
atgcggggtaaaacaggtaccctcacaggggtggtttccttaacgggctatgtggaaaac
cagcaatggggcacagtggcattcagttttatggtcaacaacagtgacctgggggcctcc
gtgctacgggaagcaatgaagcagatggtactttggactgcccaggtagaaaagtgtcag
cccagcgaccagggacggtaa
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