Parasynechococcus marenigrum: SYNW2036
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Entry
SYNW2036 CDS
T00144
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syw03016
]
SYNW2036 (rnd)
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SYNW2036 (rnd)
Transfer RNA biogenesis [BR:
syw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SYNW2036 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAE08551
CyanoBase:
SYNW2036
UniProt:
Q7U4N1
LinkDB
All DBs
Position
complement(1932487..1933131)
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AA seq
214 aa
AA seq
DB search
MADSLPAPAEFAVFDGDLDADWTERYLRMSALAVDTEAMGLIHGRDRLCLVQIADADDRV
CCIRIGLGQTSAPNLQRLLEAASVEKVFHFARFDVAALASGLGIAVSPIFCTKVGSRLGR
TYTPRHGLKDLVMELVGVELDKGAQSSDWGRVDELSDVQLAYAANDVRYLLPARQKLEAM
LRREGRWDLAQRCFGCIPVIADLDRMRFNQTFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgcttcctgctcccgctgaattcgcggtctttgacggcgatctggatgcg
gattggaccgagcgatacctgcgcatgtccgccctggcggtggacaccgaggcgatgggt
ctgatccatggccgtgatcgtctctgcctggttcagatcgctgatgccgacgatcgggtc
tgctgcattcggatcggacttggtcagacctcggcgcccaatctgcagcggctcctggag
gccgcttccgtggaaaaggtcttccacttcgcccgcttcgatgtggcagcgctggccagc
ggcctcggcatcgccgtcagccccatcttctgcaccaaggtgggtagccgtcttggtcgc
acctacacaccccgccatggtttgaaggacctggtgatggagctggtcggggttgaactc
gacaagggtgcccagagcagcgactggggccgggtggatgagctcagcgatgttcagctc
gcctacgccgccaatgatgtgcgctatctgctgccggcacgtcagaagctggaagccatg
ctgcgtcgtgaggggcgctgggatctggcgcagcgttgcttcggatgcattcctgtgatc
gcggatctggatcggatgcgcttcaaccagaccttcgagcactga
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