Parasynechococcus marenigrum: SYNW2194
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Entry
SYNW2194 CDS
T00144
Name
(GenBank) possible Fe-S oxidoreductase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syw03009
]
SYNW2194
Enzymes [BR:
syw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SYNW2194
Ribosome biogenesis [BR:
syw03009
]
Prokaryotic type
ribosomal protein modification factors
SYNW2194
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CAE08709
CyanoBase:
SYNW2194
UniProt:
Q7U477
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All DBs
Position
2092534..2093928
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AA seq
464 aa
AA seq
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MAGGAVMTSTPTKPTVAFAHLGCEKNRVDTEHMVGLLAQAGYGVSTNENDAAVVVVNTCS
FIQDAREESVRTLVGLAEQGKELIIAGCLAQHFQDELLESIPEAKAIVGTGDYQHIVEVL
QRVEAGERVNRVSAVPTFVGDEHLPRQRTTDQAVAFLKVAEGCDYRCAFCIIPKLRGDQR
SRPIESIVAEAHQLVEQGVQELILISQITTNYGLDLYGKPKLAELLRALGEVEIPWIRVH
YAYPTGLTPEVLAAYREVPNVVPYLDLPLQHSHPEVLRAMNRPWQADVNDRLLDQIRDQL
PDAVLRTTLIVGFPGETEEHFQHLMEFLRRQRFDHVGVFTFSPEDGTAAAELPNPVDPDV
AQARKDALMALQQPISAERNHSWVSRTVDVLIEQHNPQTGQMIGRCARFAPEVDGEVHVQ
PGEDGQKAAPGTMVPVQITGADVYDLSGRIVGARDMVAAIRADA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcgcagtgatgacaagcaccccgacgaaaccaacggtcgcgttcgcccac
ctgggctgcgaaaagaatcgtgtggacaccgaacacatggtgggtttgctggcgcaggcc
ggctacggcgtcagcaccaacgaaaacgatgcggctgtggtggtggtgaacacctgcagc
ttcattcaggacgcccgcgaggaatcggtacgcacccttgtgggcctggcggaacagggc
aaggaactgatcattgccggctgtctggcccagcattttcaggatgaactgctcgaatcg
attcctgaagcgaaggcgatcgttggcaccggcgactaccaacacatcgtggaggtgttg
cagcgggtggaggccggcgagcgggtgaaccgcgtcagcgccgtgcccacctttgtcggg
gatgaacacctgccgcgtcagcgcaccacggaccaggcggtggcgttcctcaaggtggcg
gagggctgcgactaccgctgcgccttctgcatcattcccaagctgcggggcgaccaacgc
agccggccgatcgaatcgatcgtggccgaagcgcaccaactggtggagcagggggtgcag
gagctgatcctgatcagtcagatcaccaccaactacggcctggatctatacggcaagcca
aagctggcggaactgctgcgggccctgggagaggtcgagatcccctggatccgcgtgcac
tacgcctacccgacgggtctgacaccagaggtgctggcggcctaccgggaggtgcccaat
gtggttccctatctggatctgccgctgcagcacagccacccggaggtgctgcgggcgatg
aaccgaccctggcaagcggatgtgaacgaccggctgctggatcagatccgcgaccagctc
cccgatgcggtgttgcgcaccaccttgatcgtgggctttccaggcgaaacggaggagcac
ttccagcacctgatggagttcctgaggcgccaacgcttcgatcacgtgggcgtgttcact
ttctcgccagaggacggcaccgccgctgctgagcttcccaacccggtggatcccgacgtc
gcccaggcccgcaaggacgccctgatggcgctgcagcaacccatttccgccgaacgtaac
cacagctgggtgagccgcaccgtggacgtgctgatcgagcagcacaacccccagaccggg
cagatgattggccggtgcgcccgctttgcgccggaggtggatggggaggtgcatgtgcag
cctggagaggacggccagaaggccgccccaggcacaatggtgccggtgcagatcacgggt
gccgacgtctacgacctgagcggacggatcgtgggggcccgcgacatggtggcggcaatc
agagccgacgcttga
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