Tumebacillus algifaecis: CIG75_11585
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Entry
CIG75_11585 CDS
T04994
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tab
Tumebacillus algifaecis
Pathway
tab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIG75_11585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tab03019
]
CIG75_11585
03009 Ribosome biogenesis [BR:
tab03009
]
CIG75_11585
Enzymes [BR:
tab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIG75_11585
Messenger RNA biogenesis [BR:
tab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CIG75_11585
Ribosome biogenesis [BR:
tab03009
]
Prokaryotic type
rRNA helicases
CIG75_11585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASS75565
UniProt:
A0A223D253
LinkDB
All DBs
Position
complement(2807022..2808602)
Genome browser
AA seq
526 aa
AA seq
DB search
MTTFFELNLGKKIQQAISDMGFEEPSPIQAQCIPVVLTGSDVIGQAQTGTGKTAAFGIPL
IEMAGPSKHVQALILTPTRELAIQVAGELRKIAKYKRTRTLPIYGGQSIGSQIRTLQQGV
QIVIGTPGRILDHLRRGTLKLDKLKTLVLDEADEMLDMGFIEDIEAILKETPEDRQTLLF
SATMPYEVKNLSKRYMNNPQNVSINRGEVTVPLIEQVYYKVLERTKLESLSRIIDSEEVE
LGIIFCRTKRGVDELTDALMSRGYLADGLHGDLSQAQRDRVMRKFRHTEIQLLVATDVAA
RGIDVENVTHVINFDIPQDPESYVHRIGRTGRAGKHGLALTLVTPPEFKLLKQIEKETKA
KLISKEVPSLADVAERQTEIWRDRLVRTMQDGKLATYRAILSGLVDEFDPLDLAAAALKL
ASGEDFEAQESDYNFGETGGAPGMVRFFLNIGRSAKIGPSDLVKLISEEAGIPGGAIGKI
DIFEKFTFVEVQEESAPFVFEALRKSRINGSRINLEPARPRERARK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacgacattttttgaactgaaccttggcaagaagattcaacaggcgatcagcgatatg
ggctttgaagagccatctccgattcaagcgcagtgcatcccggtcgtactcaccggcagc
gacgtgatcgggcaagcgcagaccggaacgggcaagacggctgcgtttggcattccgctg
atcgagatggctggtcctagcaagcatgtgcaggctttgattttaacaccgacccgcgaa
ttggcgattcaagtcgcaggggagctgcgcaagatcgcgaaatacaagcgcacccgcacg
ttgccgatctacggcgggcaatcgatcggctcgcagattcgaacgcttcagcaaggtgtg
cagatcgtcatcgggaccccaggccggatcttagaccatctgcgccgcggcacgctcaag
cttgacaagttgaagacgctggtgctggacgaagcggatgagatgctcgatatgggtttt
atcgaggatattgaagcgattctaaaagagacacctgaagatcggcagacgttgctcttc
tcggcgacgatgccgtatgaggtgaaaaacctctccaagcgctacatgaataatccgcag
aatgtatcgatcaatcgcggtgaggtgactgtgccgctgatcgagcaggtctactacaaa
gtattggagcgcacgaagctggagagcttgtcgcgaatcatcgattcagaagaggtggag
ctaggtatcatcttctgccgtaccaagcgcggcgtcgatgaattgaccgatgcgttgatg
agcaggggctatctggccgacggtctccacggcgatttgtcacaggcgcagcgcgaccgc
gtcatgcgcaagttccgccacacagagattcaactgctcgtcgcaaccgatgtggcagct
cgcgggatcgacgtggaaaacgtgacgcacgtcatcaactttgatattccgcaagacccg
gaatcgtatgtgcaccgcatcggtcgaaccggtcgtgctggcaagcacgggttggcgctg
acgctggtcactccgcctgagttcaaactgctcaaacagatcgaaaaggagaccaaggcg
aaactgatctccaaagaggtgccgtctttagccgatgtggcagagcggcagacggagatc
tggcgcgaccgtctggtgcgtacgatgcaggatggaaaactggcaacctaccgtgcgatt
ctctcgggtctcgtcgatgaattcgatccgctcgatctggccgccgcggcgctgaaactg
gcgagcggtgaggattttgaggcgcaagagagcgattacaactttggtgaaacgggtgga
gcaccgggcatggttcgcttcttcctgaacatcggacgcagtgcaaaaatcggtccgagc
gacctcgtcaaactgatctccgaggaagcgggcatcccaggcggtgcgatcggtaagatc
gacatctttgagaagttcacttttgttgaggtgcaggaagaatctgcgccgttcgtattt
gaagcgttgcgcaaatcgcgtatcaacggctcccgaatcaatttggaaccggccagaccg
cgtgagcgcgcgcgtaaatag
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