Tepidanaerobacter acetatoxydans Re1: TepiRe1_1402
Help
Entry
TepiRe1_1402 CDS
T02434
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tae03016
]
TepiRe1_1402
Enzymes [BR:
tae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TepiRe1_1402
Transfer RNA biogenesis [BR:
tae03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TepiRe1_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CCP26140
UniProt:
F4LUA6
LinkDB
All DBs
Position
1337130..1337678
Genome browser
AA seq
182 aa
AA seq
DB search
MRCFISIELESSIKNNINDFILQNNLKKIFSGIRWTKPDNLHITLAFLGDISADEISDVK
KILTEIAQNHMPFYIELSGLGFFPNLKHPRVLWIGIKEQLNLLKLKDDIDKKLDVFDISY
DKKPFSPHLTIGRIRDTLKIEPKAVAELEFKGSFLVTEIYLMKSDLSPTGANYTNLYNVK
LG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgagatgctttatatctattgagttagaatcttcaattaagaacaacataaacgatttt
atcttacaaaataatttaaagaaaatttttagcggtataagatggacaaaacctgacaat
ctccatattactcttgcatttttaggtgatatttccgcagatgaaatttcggatgtaaag
aagatattaacagaaatagcacaaaatcatatgccgttttatatcgaattatcaggctta
ggttttttccctaatcttaaacaccctagggtgttatggattggtattaaagagcaattg
aatcttttgaaactgaaagatgacatagataagaaactagatgtttttgacatctcttat
gacaagaagccattttcacctcatttaactataggaagaataagggatactttaaaaatc
gaacccaaggctgtagcagaactggaatttaaaggttcctttttagtcacagaaatatat
ctaatgaaaagcgatttatctcctactggagcaaactatactaacttatataatgtgaaa
cttggctga
DBGET
integrated database retrieval system
