Thermosphaera aggregans: Tagg_0906
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Entry
Tagg_0906 CDS
T01237
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tag
Thermosphaera aggregans
Pathway
tag00630
Glyoxylate and dicarboxylate metabolism
tag01100
Metabolic pathways
tag01110
Biosynthesis of secondary metabolites
tag01120
Microbial metabolism in diverse environments
tag01200
Carbon metabolism
Module
tag_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Tagg_0906
Enzymes [BR:
tag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Tagg_0906
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
LigA
Motif
Other DBs
NCBI-ProteinID:
ADG91178
UniProt:
D5U228
LinkDB
All DBs
Position
complement(857559..858896)
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AA seq
445 aa
AA seq
DB search
MPEKFDFETYHEYIDRTFKPDPDNHVIAVFRIKPAQGFTIDDAAGGVAAESSTGTWTTVY
NWYDRERVRRLSGRAYEFLDLKDGSWIVKIAYPVELFEEGNIPGLLASIAGNVFGMRRVE
GLRLEDIYLPGGFLKDFKGPSKGVEGVREIFKVKDRPIVGTVPKPKVGYSPEEVEKLATE
LLMGGLDYIKDDENLTSPKYCSFEARAKAIMKVIDKVEKETGERKAWFANITADVREMEK
RLRLVADYGNPYVMVDVVVSGWGVLNYIRDLAEEYGLAVHAHRAMHASFTRNPYHGISMF
VLAKLYRVIGVDQLHVGTAGAGKLEGGRLDVIRCAKILREQSFTPDPEDPFHLPQDMRHI
KPAMPVSSGGLHPGNLPPVIDALGPDIVLQVGGGVVGHPDGPRAGAMAVRQALDAIVKGI
PLDKYAESHRELARALEKWGFVKPI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaagttcgatttcgaaacatatcatgagtacattgatagaacgtttaaacca
gaccccgacaaccatgtaatcgctgtcttcaggattaagccagcccagggcttcacaata
gatgatgccgcggggggagtggctgctgaaagcagtacgggtacatggacaactgtttac
aactggtatgatagggagagggttaggaggctcagcgggagggcttatgagttcttggac
ttaaaggatggttcatggatcgttaagatagcgtacccggtcgagctctttgaggagggg
aatattccaggattgttggcgagcattgcgggaaatgttttcggaatgaggcgggtggag
ggattaaggcttgaggatatatacctgccgggaggatttctcaaagatttcaaaggcccc
tccaagggtgttgaaggggtaagggagatcttcaaggttaaagacaggccgatcgtgggc
actgttccgaagccaaaggttggctactcgcccgaagaggttgaaaaactcgccaccgag
ctgttaatgggtggtctggattacatcaaggacgatgaaaacctgacaagcccgaagtat
tgtagcttcgaggcaagggccaaggctataatgaaggttattgacaaggtcgagaaggag
acgggtgagaggaaggcctggtttgcaaacataaccgctgacgtcagggagatggagaag
aggctgaggctggtcgctgactacgggaatccctacgtaatggttgacgtagtagtgtcc
ggttggggagttttaaactacatcagggatctcgcagaggagtatggtctcgccgttcac
gctcacagagcaatgcacgcatcctttacgagaaacccctaccacggaatatcaatgttc
gtgctagcaaagctttacagggtgataggggttgaccagctccacgttggaacagcaggc
gctgggaagcttgagggcggaaggctagacgttataaggtgtgcgaaaatattgagagag
cagagtttcacacctgatcccgaggatccattccacctgccacaggacatgcgtcatatt
aagccggcaatgcctgtatcctcgggtggactccaccccgggaaccttccccccgtgatt
gatgcgctaggacccgatatagtgctccaggtggggggcggggtggttgggcacccggat
ggtcccagggctggcgcaatggctgttaggcaagcattagacgcgatcgttaaagggatt
cctctcgacaagtatgctgaatcccacagggagcttgcccgtgctttggagaaatggggt
tttgttaaaccaatatag
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