Thermosphaera aggregans: Tagg_1189
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Entry
Tagg_1189 CDS
T01237
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tag
Thermosphaera aggregans
Brite
KEGG Orthology (KO) [BR:
tag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tag03019
]
Tagg_1189
03009 Ribosome biogenesis [BR:
tag03009
]
Tagg_1189
04131 Membrane trafficking [BR:
tag04131
]
Tagg_1189
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tag04147
]
Tagg_1189
Messenger RNA biogenesis [BR:
tag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tagg_1189
Ribosome biogenesis [BR:
tag03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tagg_1189
Membrane trafficking [BR:
tag04131
]
SNARE
SNARE associated proteins
Others
Tagg_1189
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Tagg_1189
Exosome [BR:
tag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tagg_1189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
TIP49
AAA_2
AAA_22
Vps4_C
AAA_33
AAA_14
AAA_28
AAA_18
IstB_IS21
RNA_helicase
nSTAND3
Mg_chelatase
AAA_25
AAA_24
Parvo_NS1
ATPase
AAA_3
Zeta_toxin
TsaE
AAA_7
AAA_17
DUF815
ABC_tran
ATPase_2
DUF5906
PhoH
Bac_DnaA
bpMoxR
SLFN-g3_helicase
NACHT
AAA_6
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ADG91457
UniProt:
D5U2V7
LinkDB
All DBs
Position
1102848..1105082
Genome browser
AA seq
744 aa
AA seq
DB search
MPSQGKSDKEIRLRVGEARQRDVGRKIGRIDTASMRALGITIGDFIEVIGPKGSEVVKAW
RAYPEDEDAGLIRIDGYVRKNIGVSPGDYVTVRPIKVEPATRITLAPVGRLPVMGDLSEY
LRERIIGIPLRRGEIVEIPVFGMVLRFAVTNTQPAPIVYVTEKTYIEVREEPVRPEAIRE
GVPRITWEDIGDLEEAKQKIREIVELPLKNPELFEHLGIEPPKGILLYGPPGTGKTLLAK
ALANEIGAYFITINGPEIMSKFYGESEERLRKIFEEAEANAPSVIFIDEIDSIAPKREEV
TGEVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDALDPALRRPGRFDREIEIPPPDKKA
RREILAVHTRNMPLSEDVDLDKIADVTHGYTGADIAALAKEAAINALRRFMQEEGIEIGQ
PIPAEKLSKLKVTMNDFLTAMRNVQPSLIREVFVEVPEVRWTDIGGLETVKQELKEAVEW
PMKYPSVFEKMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVGES
EKAIRQIFRRAKMVAPSVVFFDEIDSIAGARGSDPSGVIDRIVNQLLTEMDGIQPLRKVV
VIAATNRPDLLDPALLRPGRFDRLVYVPPPDLRARVEIFKVHTRRTPIAEDVNIEELARR
TEGYTGADIAAVCREAAMMAIRESIGEGDKPSVKKVEMRHFAEALKKVPPSLSKEDIEMY
ERLARELKRVSGSGPVRRVSLPYG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcaaggcaaatcggataaagagatacgcttacgcgtaggtgaagccaggcag
agagatgttgggagaaagataggcaggatcgacaccgccagcatgagggcgctgggaata
acgataggagactttatagaggtgatcgggccgaaggggagcgaggttgtaaaggcttgg
agagcctatcccgaggacgaagatgccggtttgataaggattgatggttacgttaggaaa
aacattggtgtttcgccgggagattatgtgactgttagacccataaaggtggagccagct
acaaggattacactcgcccccgtgggtaggctaccagtgatgggcgatctgtcagagtat
ctcagggagagaatcattggtatccctttgaggaggggcgagatagttgaaatacccgtt
ttcggcatggttttgaggtttgcagtgactaatactcagcctgcgcccatagtgtatgtg
acagagaagacctatattgaagtaagggaggagcctgttaggccagaggctatcagggaa
ggcgtccccaggattacctgggaggatataggagatttagaggaggctaagcagaagata
agggagatcgtggaactacctttaaagaatcccgagcttttcgaacacctaggcatagag
ccacctaagggaatcctcctctacggaccgccggggactggtaagacactgctagctaag
gccttagccaacgagatcggcgcctactttataactatcaatgggccggagataatgagc
aaattctacggggaatccgaggagaggttgaggaagatttttgaagaggcagaggcgaac
gccccctcagtcattttcattgacgagatagacagtatcgccccgaagagggaggaggtc
acgggcgaggtcgagaaaagagtcgtggcgcaactcttaacgttgatggatggtttgaag
gagaggggtagagtaatagtcataggtgccactaaccggcctgacgccttagaccctgcc
ttgaggaggcccggcaggtttgacagggagatagagatcccgcctcccgataaaaaagca
aggagggagatcctagcggttcacaccaggaatatgcctctcagcgaggatgtggatctg
gataagatagcggatgtaacgcacggatacaccggtgctgatattgctgcattggcgaag
gaggcggctattaatgccctgagaagattcatgcaggaggaagggattgagattgggcaa
cccatccctgctgaaaagctctccaagttgaaggtcacaatgaacgatttcctaacggcg
atgagaaacgtgcagccctcgctcatcagggaggtgttcgtggaggttccagaggtaagg
tggacagacataggaggattggaaaccgtgaagcaagagctgaaggaggccgttgaatgg
cccatgaagtatccctccgtgttcgagaaaatgggtattgagcccccgaagggcatacta
ctgtttggtccaccaggtactggtaaaacactgctcgccaaggctgtagcaaccgagagc
ggggctaactttataactgtcagaggccccgaggtactcagcaaatgggttggcgagtcg
gaaaaagcgattagacagatcttcaggagggccaagatggtggcaccctccgtcgtgttc
ttcgacgagattgactcgatagcgggcgctagagggtcggaccccagcggggttatcgac
aggattgtaaatcagctactcactgagatggacggtattcagccgttgagaaaggttgtg
gttatagcggcaacgaacaggccggatttgctagacccagcgcttcttcggccgggcagg
tttgacaggctagtgtatgttccgcctcccgacctcagggcaagggtggaaattttcaaa
gtccacacaaggaggacgcctatcgcggaggatgtaaatattgaggagcttgcaaggaga
accgagggatacacgggagctgatatagcggcggtgtgcagggaggctgcaatgatggct
ataagggagtctatcggcgagggcgacaaaccctccgtcaagaaggtggagatgagacat
ttcgcagaggcattgaagaaagtgccgccctcgctctccaaggaagatattgaaatgtat
gagagacttgctagggagttgaaaagagtcagcggtagtggccctgttagaagggtgtcc
ctgccctacgggtaa
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