Thermovibrio ammonificans: Theam_1505
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Entry
Theam_1505 CDS
T01391
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tam
Thermovibrio ammonificans
Pathway
tam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theam_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tam03019
]
Theam_1505
03009 Ribosome biogenesis [BR:
tam03009
]
Theam_1505
Messenger RNA biogenesis [BR:
tam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Theam_1505
Ribosome biogenesis [BR:
tam03009
]
Prokaryotic type
rRNA helicases
Theam_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
UTP25
P-loop_SecA
AAA_30
ERCC3_RAD25_C
Choline_sulf_C
DUF6686
Motif
Other DBs
NCBI-ProteinID:
ADU97466
UniProt:
E8T4K8
LinkDB
All DBs
Position
complement(1469297..1470550)
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AA seq
417 aa
AA seq
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MEFSFSQLDERIQKSLEEMGFVEPTPIQKEAIPLALEGHDLVGQAQTGTGKTAAFGIPLV
SGISPRERGVKAIVLTPTRELAIQVAHELSLIGKNKGVSAFPIYGGVSIERQINALKRGR
HQIIVGTPGRVKDLINRGVLRLDRVRYAVLDEADQMLDMGFIEDIEEILSKTPKEKQTLL
FSATMPYEIRRLIGRYLKPDYKNVKVGKQLITPKVKQRIILVRSEDKIKALEKLLKEHEG
VSTIVFVKTKRDAADIEKELQRRGINARAIHGDLSQRQREFVMRAFREGKVKVLVATDVA
ARGIDIKDVGLVINYELPENPESYVHRIGRTGRAGREGLAISLVAEPEKRRLYRIKGLKG
VRPERFRVNTVKELKKELLEADANSLPPYVKRLASELLSERSPEELVAVLLSKLLSR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctttctcacagcttgacgagcgtattcagaaatcgcttgaggagatggga
tttgttgagcccacgcctatccagaaagaggctattccccttgcccttgagggtcacgac
cttgtagggcaggcccaaaccggaaccggcaaaactgcggccttcggtatccctctggtt
tccggtataagtccccgggagcgcggcgttaaggcaatagttctcactcctaccagggag
cttgcaattcaggtggcccacgagctctcccttatagggaagaacaagggagtttcggcc
tttcccatctacgggggcgtttccatagagaggcagataaacgcgcttaagagggggcgc
caccagataatcgtgggcactccgggcagggtgaaagaccttataaacaggggagttctc
cgcctcgacagggtccgttacgccgtgttggacgaggcagaccagatgctcgacatgggc
ttcatagaagatatcgaggagatactctctaaaactcccaaggagaaacagacccttctc
ttctccgctaccatgccctacgagataaggcgccttatcggcaggtacctaaaacccgac
tacaagaacgtgaaagttggcaagcagctcataacgccgaaagttaagcagaggataatc
cttgtaaggagtgaggataagataaaggcccttgagaagctcctgaaagagcacgagggc
gtatctacaatagtctttgttaaaaccaagagggatgctgccgatattgaaaaggagctt
caacgccgcggaattaacgccagggccattcacggtgacctctctcagaggcagagagag
ttcgttatgcgcgcctttagggaggggaaggtgaaggttttggttgccaccgacgttgcc
gcccggggtatagacataaaagacgttgggctcgttataaactacgagcttcccgagaac
cccgagagctacgtccaccgtataggcagaaccggaagggccggaagggaagggcttgcc
atcagccttgttgccgagcccgaaaagaggcgcctttacaggataaagggtcttaaagga
gtaaggcccgaacgtttcagggttaacacggtaaaggagctgaagaaagagctccttgag
gccgatgcaaactcccttcccccttacgttaagcgtttggcatcggagcttctgagcgag
cgctctccagaggagctcgttgccgttttactatctaaactgctgagcaggtag
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