Thiomicrospira aerophila: THIAE_09440
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Entry
THIAE_09440 CDS
T03589
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tao03016
]
THIAE_09440
Enzymes [BR:
tao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THIAE_09440
Transfer RNA biogenesis [BR:
tao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THIAE_09440
Prokaryotic type
THIAE_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
ACT_5
Motif
Other DBs
NCBI-ProteinID:
AHF01952
UniProt:
W0DU27
LinkDB
All DBs
Position
complement(1906750..1907787)
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AA seq
345 aa
AA seq
DB search
MSHIAQLPYAFGGPLGCAQLKQTPADFQVEEILSYPLTGQGEHLWLWVEKVGQNTDWVAQ
QLAKLANIRLRDIGFAGLKDRHGITRQWFSLYLPGQADPAWAQWQIEGVTILSSTRHQRK
LQTGGLKGNRFIIHLREVTADPAQIDARLQQMAVAGVPNYYGPQRFGRNEHNLVMAQRLF
AGELTRLRPAQRSLYISAARSFLFNQVLAERVRQGSWNQACLGDVFQLEGSTKWFADDAS
ADLAQRVQEYDLHPTGPLVGVEPSPATSVALQLETAVLQDYQTWCQGLYALQLKTGRRAL
RLNAQAVSWHWLQEAEQSMPDLVIQFELAAGQYATVWLREAVELS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacatagcacaactcccctatgcgtttggtggtcctttgggctgtgcgcaactt
aagcaaacacctgccgattttcaagttgaagaaatcctatcctatccattaaccggtcaa
ggtgaacatctgtggctgtgggttgaaaaggtcggtcaaaacaccgactgggtggcacaa
caattggctaagttagccaatattcggttgcgtgatatcgggtttgctggtttaaaagac
cgtcatggcatcacccgccaatggtttagtttgtatttgcctgggcaagccgacccagca
tgggcgcagtggcagattgaaggggtgacgattttgtcgtctacacgtcatcaacgaaaa
ttacaaactggcggattaaaaggcaatcgcttcattattcacttgcgcgaggtgacggct
gatcctgctcagattgatgcgcggctacaacagatggccgtcgccggtgtgcccaattac
tacggcccgcagcgctttgggcgcaatgaacataatttggtgatggcgcagcgtttgttt
gccggggagttgacgcgtttaaggccggcacagcgcagtttgtatatttccgccgcacgt
tctttcctttttaatcaagtgcttgccgagcgagtgcggcaggggtcttggaaccaggcc
tgcttgggtgatgtttttcagcttgagggttcaaccaagtggtttgcagacgatgccagt
gcagatttagcccagcgcgtgcaggagtatgatcttcacccaaccgggcctttagtggga
gtggagccatcacctgcgacgtctgtagcactgcaattggaaacggctgtgttacaggat
taccagacctggtgccagggtttatatgcgttacagctgaaaaccggccgacgtgcatta
cgccttaatgcacaggcggttagctggcattggttgcaggaagcggaacagtcaatgcct
gatttggtgattcaatttgagttagcggcagggcagtatgctaccgtgtggttgcgcgaa
gcagttgaattaagctaa
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