Leadbettera azotonutricia: TREAZ_1212
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Entry
TREAZ_1212 CDS
T01506
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
taz
Leadbettera azotonutricia
Pathway
taz03410
Base excision repair
taz03430
Mismatch repair
taz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TREAZ_1212 (recJ)
03430 Mismatch repair
TREAZ_1212 (recJ)
03440 Homologous recombination
TREAZ_1212 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taz03400
]
TREAZ_1212 (recJ)
DNA repair and recombination proteins [BR:
taz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TREAZ_1212 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TREAZ_1212 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TREAZ_1212 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEF80700
UniProt:
F5Y6Q8
LinkDB
All DBs
Position
complement(1203200..1205341)
Genome browser
AA seq
713 aa
AA seq
DB search
MNWEKKDIPPEQVKELAAKYGCDHLTASILLRRGLSSGEDIRYFLEEDPRYLRSPFELPG
MEDAVERVLAAKEEEEKVLVFGDRDTDGITSTAMVVNFLTGLGMDVSWKLPSGDDRYGLS
MEAIEEFAAAYGTLIITVDCGISNTAEIRRANELSVDVIITDHHNPQEEIPEALAIVNPK
LPGSPFPYLSGCGVAYKLVSALRFALKSELYNQPMCLLNTRPVNDAWIIEIAKMRNLVVR
QTLIETVVPGMVSISNTRLPAFLESQQILAWDAPQQKRTLAKIFGKGVEIGMLDVAPDIG
KMIPSAKDISLLRIKELSRIARYSEKESGELEVFINLFTTFVQRRENHFTDEDAADLQFA
CLGTIADIMPLKDENRIIVRRGLQSLIEKPRPGLSELLFKLGMSGRRLNAQDVSWLLCPA
INAAGRMGSPEKGAALFLEKDPSVRDRLAADLVSMNEDRKKMGEESWALVEPRARENLEN
FDSKLAFAFGEDLPRGVTGIMANRLVGQFKVPALVVSFGKDGLATGSLRSPGNYDLRFLL
EPCEDLFLDWGGHDYAAGFSMETGEAMANWNSFLERLKNIALNMEFGDSKNESAITVDAE
LPLNYLNADILKTVDRFEPYGEENRPLNFLAKGLRVSDLHFMGKPEAKHVKLTLDAGKYK
WPAKYWNAADKVKREFDTGDTVDLIFSVSRNFFKGIETPEMTVTDLKRSETKN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaattgggaaaagaaagacatcccccctgaacaagtcaaggaactggccgccaaatat
ggctgcgatcacctcaccgcttccatactgctccgccggggcttgagctcgggggaagat
atacgctacttcctggaagaagatccccgctacctcagaagcccttttgagcttccgggt
atggaagatgcggtagagcgggttcttgccgcgaaagaagaggaagaaaaggtgctggtc
tttggcgacagggatactgacggaatcaccagtaccgccatggtcgtgaatttcctgacc
ggccttggcatggacgtaagctggaagctcccttcaggggatgaccgctatggcctcagc
atggaagctattgaagaatttgccgccgcttatggcaccctcattattactgtcgactgc
ggtatttccaatactgcagaaatcagaagggcaaatgaattaagcgtagatgtgataatc
acggatcatcataacccccaggaagaaatacccgaagcccttgccattgtgaaccccaag
ctgcccggttcgcctttcccctatctttcgggctgcggggttgcctacaaactggtgtcg
gcactgcgcttcgccctaaaaagcgagctttacaatcagcccatgtgcctcctcaatacc
aggcccgtcaacgacgcatggatcatagagattgcaaagatgcggaacctcgttgtaagg
cagacgctcatcgaaacagtagtgcccggcatggtaagcatcagcaacacaaggcttcct
gcttttctcgaaagccagcagatacttgcctgggatgcgccccagcagaaacgcactttg
gcaaagatattcggcaaaggggttgagataggcatgctggatgttgccccggatataggc
aaaatgataccttccgcaaaggatataagccttctcaggatcaaggagctttcgcgtatc
gccaggtattcggaaaaggaatcgggggagcttgaagtcttcatcaatctttttactact
tttgtgcagaggcgcgaaaaccattttaccgatgaagatgcggcggatctgcagtttgcc
tgcctcggcactatcgcagacatcatgcccctcaaagatgaaaaccgcatcattgtgcgg
aggggcctccagtccttaattgaaaaacccaggcccgggctctcggaactcctttttaag
cttggcatgtcagggcgccgccttaacgcccaggatgtttcctggctcctctgtcctgcc
atcaatgccgccggccgcatgggaagccctgaaaagggggcagccttgttcctcgaaaaa
gatccctctgtgagggatcgccttgccgccgatcttgtatccatgaacgaggaccgcaaa
aaaatgggcgaagaaagctgggctttggttgaacccagggccagggagaacctggaaaat
tttgacagcaagctggcctttgcctttggcgaagatcttccccggggtgttaccggcatc
atggcaaaccgcctggtggggcagttcaaagtgcccgccctggtagtctccttcgggaag
gacggccttgccacgggctcgcttagatcccccgggaattacgatctccgtttccttttg
gagccctgcgaggatctcttcctcgactggggcggccatgactacgcggcagggttcagc
atggaaacaggcgaagccatggctaactggaacagcttcctcgagcggctaaaaaacatt
gccctcaatatggaattcggcgacagcaaaaatgaaagcgccataacagtggatgccgag
cttccgcttaactacctcaatgccgacatactcaaaaccgtggatcgttttgaaccttat
ggggaagaaaaccggcccttgaatttccttgccaaagggctccgcgtatccgaccttcac
ttcatgggcaagccggaagcaaaacatgtcaagctcaccctggatgcgggaaagtacaag
tggccggccaagtactggaacgctgcggataaagtaaaaagggaattcgacaccggggat
accgttgatttgatattcagcgtaagccgaaattttttcaagggcatagaaacccctgaa
atgacagtaacagacttaaaacgttcggaaacaaaaaattga
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