KEGG   Trypanosoma brucei brucei: Tb927.5.2790
Entry
Tb927.5.2790      CDS       T01013                                 
Name
(RefSeq) mitochondrial DNA polymerase beta-PAK
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tb927.5.2790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb927.5.2790
Enzymes [BR:tbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tb927.5.2790
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     Tb927.5.2790
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     Tb927.5.2790
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2
Other DBs
NCBI-GeneID: 3657387
NCBI-ProteinID: XP_844951
UniProt: Q57ZV5
LinkDB
Position
5:complement(882351..884792)
AA seq 813 aa
MLLFRPTLLLSAAKRTAASANARRPAKRAVVAAATTSPAATSVPPPVRPAKRPVVPSPTP
APPPPRPSKKPVAQAGAPAPVAPPSPRPVKRPVVAAAAPTPPTPRPVKKPPAAPAQTPAP
PPPRPWKKPVAQAGAPAPVAPPSPRPVKRPVVAAAAPTPPTPRPVKKPPAAPAQTPAPPP
PRPSKKPVAQAGAPAPVAPPSPRPVKRPVVAAAAPTPPTPRPVKKPPAAPAASAPPSPKP
AKKQAAAAASAPVSPRPVKQPAGTRARSQPKKPATKAKSPPAPPPAALPAPAPAAVPVTP
KIKPTDFVPDYRERVLQIFQQLAEINKALDERYKASSYVVAVERLKRNDYIYMNFPPNIM
PPGVNDEERKRLVAKVKNTTAMGDKLREKIVEILTTGDLAELHLLQQTPLIRAVRELTQV
HGVGPRTAVIFFKKHGLKTVEELRKRVEEQEANEGGKGSSGDKSALKLTEAQRLGLKYYS
DITQRIPHAEVRLHEAFLKLRLRKYLGKSYELAICGSYRRRLATSGDIDVLITRKIVADE
GATPQGASEETSREKDGSLKVEKQLEPQEVLAAFVSALKEERYIEATLAQGATKFMGVSR
LKSYKYNAGTANPRMYPARRLDIRFVEPECFPAALLYFTGSKNFNVVMRAEAIKRNFILN
EYGLFRNDATGNEPTSSSETGGRVAGDGADKGAIRGRWSAEAFQKLVRANYYSAKSPAFV
GTIEDAVDDEKDGEAAVGKNAKGSSATSRKQKQQQAKELAALWREVEARRVKVKHEREIF
AALGMAYVHPEKRDVGTKTEGNVVGADKKRRSK
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgcttttgttccgccccaccttgctgctctccgctgcgaagagaacagcggcttccgcg
aacgcgcggcgccccgccaagagggcagtagttgcggctgctaccacgtcaccggcagca
acttcagtcccgccacccgtgaggccggcaaagagacctgtagtaccaagcccaacaccg
gcgccaccaccaccaaggccatcgaagaaacccgtggcgcaggctggagcacctgcaccc
gttgcaccaccttcaccaaggcccgtaaagagaccagttgtagctgccgcagcaccaaca
ccgccaactccgaggcctgtgaagaagccgccggcagcacctgcgcagacaccggcgcca
ccaccaccaaggccatggaagaaacccgtggcgcaggctggagcacctgcacccgttgca
ccaccttcaccaaggcccgtaaagagaccagttgtagctgccgcagcaccaacaccgcca
actccgaggcctgtgaagaagccgccggcagcacctgcgcagacaccggcgccaccacca
ccaaggccatcgaagaaacccgtggcgcaggctggagcacctgcacccgttgcaccacct
tcaccaaggcccgtaaagagaccagttgtagctgccgcagcaccaacaccaccaactcca
aggcctgtgaagaagccgccggcagcacctgcggcttcagcaccaccgtctccgaagcca
gccaaaaaacaagcggcggctgcagcaagtgccccggtgtctccgaggccagtgaagcag
ccagctgggacccgtgcacgatcccaaccaaagaaaccggcaactaaggcaaagtctcct
ccggcccctcctcccgccgcgttgcctgcaccagcacccgcagccgtacccgtcacccca
aaaatcaaacccactgactttgtccccgattaccgtgaaagagtgctgcagatattccaa
cagcttgcggagatcaacaaagccttggatgaacggtacaaggcaagctcgtatgttgtc
gctgtggagaggctaaagcggaatgattacatctatatgaactttccaccaaacatcatg
ccccctggggtaaacgacgaggagcgcaaacggcttgtggcaaaggtgaaaaatacgacg
gcaatgggcgacaaactcagggaaaagatcgttgagatccttacaacgggtgatctcgcc
gagctccatttattgcagcaaacaccactgattcgtgctgtaagagaactcacacaggtg
catggcgtcgggccgcgcacggctgtgattttcttcaaaaagcacggcttgaaaactgtc
gaagaactgagaaagcgtgtggaggaacaagaggctaatgaaggaggaaaaggaagtagt
ggtgacaagtctgcactaaaactgactgaggctcagcgattgggactcaagtactacagc
gatattactcaacgcattccacacgcagaggttcgcctgcacgaggcttttcttaagctg
cggctgcggaagtaccttgggaagagctacgagcttgccatatgtgggagctaccgcagg
cggttggcaacgtcaggagatatagatgtgcttatcacacgcaagatagtagcagacgaa
ggtgcaacaccccaaggcgccagtgaagaaaccagcagggagaaggacggatccctcaag
gtcgagaaacagttagaaccacaggaggttcttgcagcttttgtttccgccctgaaggag
gaacggtacattgaagcgacccttgcacagggagcaacgaaattcatgggtgttagtcgt
ctgaaaagttacaaatacaacgccggtacagcgaacccgaggatgtaccctgcacgacgg
ttggatatccgctttgtggagccagaatgttttcccgcggcgcttctgtacttcacagga
agcaagaactttaatgttgtcatgcgtgcggaggctatcaagcgcaacttcattctcaat
gagtacggcctattccgtaacgatgctactgggaatgaaccaacatcgtcctccgaaacc
ggtggcagggttgccggagatggggctgacaaaggtgccatccgcggccgctggagcgca
gaggcgtttcagaagttagtccgtgcgaattattactctgccaagtccccggcatttgtt
ggcacaatagaagacgcggtggacgatgaaaaggatggcgaggcggcggtcgggaagaac
gcaaagggctcaagcgcaacgtcacgaaagcagaagcagcagcaggcgaaggagcttgca
gctctctggcgtgaagtagaggcccgtcgcgtaaaggtgaaacacgaacgtgagatattt
gcagccttggggatggcatatgttcacccagagaagcgggatgtaggaacgaaaacagaa
gggaacgtggttggagcagataaaaaacgaagatcaaaatga

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