Trypanosoma brucei brucei: Tb927.7.1170
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Entry
Tb927.7.1170 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K12876
RNA-binding protein 8A
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03013
Nucleocytoplasmic transport
tbr03015
mRNA surveillance pathway
tbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tb927.7.1170
09122 Translation
03013 Nucleocytoplasmic transport
Tb927.7.1170
03015 mRNA surveillance pathway
Tb927.7.1170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb927.7.1170
03041 Spliceosome [BR:
tbr03041
]
Tb927.7.1170
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Tb927.7.1170
Spliceosome [BR:
tbr03041
]
Complex C
Other components
EJC/TREX
Tb927.7.1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
3658325
NCBI-ProteinID:
XP_845741
UniProt:
Q57WT3
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All DBs
Position
7:298948..299427
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AA seq
159 aa
AA seq
DB search
MITEGAATPCAEVPAIRRVRRTRSRFERLVRPEDVAPGEPTPSVEGWVLFLTNLPPNTTM
DHITDLFVTREGEGLWNVREVKMPLDKNCECCGYALVELEKREAFEAALRDMEGMTLSFA
EGEPPNGEDAWRLHIAPTFLGEKDDEEEELVAGGKRERE
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgattacagagggcgccgctacaccctgtgccgaggtgccggcgattcgccgtgttcgg
cgaactcgttcacgctttgagcgtctcgtccgccctgaggatgtcgcccccggtgagcca
acccctagtgtggagggatgggtcctattcctcaccaacttaccacccaacaccacgatg
gaccacatcactgatctttttgttacgcgtgagggtgagggactctggaacgtgcgggaa
gtgaaaatgccccttgataaaaattgtgaatgttgcggttatgcactggtggaattggaa
aagcgcgaagccttcgaggccgcattgcgagatatggaaggaatgacgttgtccttcgct
gagggtgaaccaccaaacggcgaggacgcgtggcgtcttcacatagctccgacattcctc
ggcgagaaggacgacgaagaagaggagttggtggcgggaggaaaacgggagcgtgagtag
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