KEGG   Theobroma cacao (cacao): 18586632
Entry
18586632          CDS       T02994                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18586632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcc03021]
    18586632
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18586632
Enzymes [BR:tcc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     18586632
Transcription machinery [BR:tcc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     18586632
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     18586632
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 18586632
NCBI-ProteinID: XP_007010184
LinkDB
Position
10:7169825..7173554
AA seq 193 aa
MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH
MLDDLRRKDPELYKRNGILPMLKRNSSVKLAPQRWQDNAADGTFNIVFTFEEKVFDMVIE
DLHNRDQVLLKSVLVINLEVKDNHEEAAIGARLALDLCEQIEAAESWEESIDDILASFEN
KHRRKLLYSISFY
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaaattccggtacgccatggtttgttcatcgaaccagaaccggagcatggaggcccac
tcgctcctgaagaagcaggggttcgacgtctcctcctacggaacgggggctcacgtcaaa
cttcctggaccctcccttagagaacccaacgtctacgagtttgggaccccttacaagcac
atgctggatgacctccgccgtaaagaccccgagctgtacaagcgtaatggcatattgccg
atgcttaaaaggaactcaagtgtgaaattggcaccgcaacgttggcaagacaatgctgct
gatggtacctttaacattgttttcacctttgaagagaaggtgtttgatatggtcattgaa
gatctgcacaaccgggatcaagttctcttgaaaagtgtgctggtgatcaacttagaggtc
aaagataaccatgaggaagcagccataggagcccgtctagctttagatctttgtgagcag
attgaagctgctgagtcatgggaggaatcaattgatgatattctggcttcttttgagaac
aagcatcggcggaagctactgtatagcatctctttctactga

DBGET integrated database retrieval system