KEGG   Thermococcus celer: A3L02_06365Help
Entry
A3L02_06365       CDS       T05076                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tce  Thermococcus celer
Pathway
tce03030  DNA replication
tce03410  Base excision repair
tce03420  Nucleotide excision repair
tce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L02_06365
   03410 Base excision repair
    A3L02_06365
   03420 Nucleotide excision repair
    A3L02_06365
   03430 Mismatch repair
    A3L02_06365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tce03032]
    A3L02_06365
   03400 DNA repair and recombination proteins [BR:tce03400]
    A3L02_06365
Enzymes [BR:tce01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A3L02_06365
    6.5.1.6  DNA ligase (ATP or NAD+)
     A3L02_06365
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A3L02_06365
DNA replication proteins [BR:tce03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A3L02_06365
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A3L02_06365
DNA repair and recombination proteins [BR:tce03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3L02_06365
   NER (nucleotide excision repair)
    Other NER factors
     A3L02_06365
   MMR (mismatch exicision repair)
    Other MMR factors
     A3L02_06365
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: ASI99213
UniProt: A0A218P2T2
LinkDB All DBs
Position
1155506..1157185
Genome map
AA seq 559 aa AA seqDB search
MRYSELADLYQRLEKTTLKTLKTRFVADFLKGTPDDLLEIVPYLILGKVFPDWDERELGV
GEKLLIKAVSLATGVSEGEIEDSVRDTGDLGESVALALKRKKQRSFFSQPLTIRRVYDTF
VKIAEAAGQGSQDRKLKYLANLFMDAKPEEGKYLARTVLGTMRTGVAEGLMRDAIAEAFG
VKAELVERAYMLTSDFGYVARVAKLEGDGGLAKVRIQVGKPIRPMLAQNAAGVKDALEEM
GGRAAFEIKYDGARVQVHKDGEVVIIYSRRLENVTRSIPEMVEAIKESLKAEKAIVEGEL
VAVGEGGRPRPFQYVLRRFRRKYNIEEMVERIPLELNLFDIMYVDGEELIETPFSERRKR
LEEAVSQSERVKLAEQLVTDNADEAEEFYHRALELGHEGLMAKRLDSIYEPGNRGKKWLK
IKPTMEDLDLVIVGAEWGEGRRAHLLGSFLVAAFDPHSGEFVPVGKVGSGFTDEDLAEFT
KMLRPLIVREEGKNVEIEPKIVIQVTYQEIQRSPKYRSGFALRFPRYVALREDKSPEEAD
TIERISQLYELQERFKARK
NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt
atgaggtactcggaactggccgacctttatcaacggctggaaaaaaccaccctgaaaacg
ttgaagacgcgcttcgtggccgatttcctaaagggaacgccggatgatctcctcgaaatc
gtcccctacctcatcctcgggaaggtcttcccggactgggacgagcgggaactcggagtc
ggtgaaaagcttctcataaaggccgtctcgctggcgacgggcgtttcagagggggagata
gaggattcggtgagggacaccggggacctcggcgagagcgtggcgctggctttgaagagg
aagaaacagaggagcttcttctcacagcccctgacgatcaggcgggtctacgataccttc
gttaagatagccgaggcggccgggcaggggagccaggacaggaagctgaagtacctcgcg
aacctcttcatggacgccaaacccgaggaggggaagtacctcgcgaggacggtcctcggg
accatgagaaccggggtcgccgaggggctgatgagggacgcgatagcagaggccttcggt
gttaaagccgagctcgtcgagagggcctacatgctaacgagcgacttcggttacgtcgcg
agggtagcgaaactcgagggcgacggtggccttgcaaaggtcaggatacaagtgggcaag
cccataaggccgatgctggcccagaacgcggcgggagtgaaggacgccctcgaggagatg
ggcggaagggccgccttcgagataaagtacgacggggcgcgcgttcaggttcacaaggac
ggcgaggtggtcatcatctattcgagaaggctggagaacgtgacgaggtcgatccccgag
atggttgaagccataaaagagagcttgaaggcggagaaagctatagtcgagggcgagctc
gtcgccgttggcgagggcgggagaccgaggcccttccagtacgtcctgcggaggttcagg
cggaagtacaacatcgaggagatggtggagaggatccccctcgagctgaacctcttcgac
atcatgtacgtggatggggaggagctaatagagacgcccttctccgagcggaggaagagg
ctggaagaggcggtctctcagagcgagagggtaaagctggctgaacagctggtaactgac
aacgcggatgaggcggaggagttctaccatagggccctcgagctcggccacgaggggctg
atggccaagaggctcgactcgatctacgagcccggtaaccgcggcaagaagtggctcaag
ataaagccgacgatggaggacttagacctcgtcatcgtaggggcggagtggggggagggc
aggcgcgcgcatctcctcggttcgttcctcgttgcggccttcgacccccacagcggcgag
ttcgtccccgttggcaaggtggggagcggctttacggacgaggacctggccgagttcacg
aagatgctcaggcccctgatagtccgcgaagagggtaagaacgttgagatagagccgaaa
atcgttattcaggtaacctaccaggagatacagaggagcccgaagtacaggagcggcttc
gcgctgaggttcccgcgctacgtcgccctcagggaggacaagagccccgaggaagcggac
accatcgagaggatatctcaactctacgagctccaggagaggttcaaggccaggaagtga

DBGET integrated database retrieval system