Thauera chlorobenzoica: Tchl_0662
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Entry
Tchl_0662 CDS
T04612
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tchl_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcl03019
]
Tchl_0662
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_0662
Enzymes [BR:
tcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tchl_0662
Messenger RNA biogenesis [BR:
tcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tchl_0662
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tchl_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Helicase_Sgs1
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
APR03526
UniProt:
A0A1L6F9T0
LinkDB
All DBs
Position
complement(670721..672568)
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AA seq
615 aa
AA seq
DB search
MFADTPSPPPATGGRAQQVLAHVFGYSAFRGEQQAIVEHVAAGSDALVLMPTGGGKSLCY
QIPALLREGTAIVVSPLIALMQDQVSALVEAGVRAAFLNSSQDADTARAVERAAYVGELD
LLYVAPERLMTPRFLDQLDHLRDTGRLALFAIDEAHCVSQWGHDFRPEYLQLSILPERYP
AIPRIALTATADRQTREEIARRLNLTHARRFISSFDRPNIRYTIVDKDDPRRQLLAFIRE
ECPGQAGIVYCLSRRKVEETAAWLCEHGVNALPYHAGMTQELRAGHQTRFLREDGLVMVA
TIAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLAAQAWMAWGAQDVVQQRRMI
DESEASEEFKRLARNRLEVLVGLVEATTCRRQHLLAYFGEDSAPCGNCDNCLSPPQTWDA
TEAARKALSCVYRTGQRYGAGHLIDVLRGELTDKVVERGHQDITTFGIGSELDEKRWRTV
FRQLVARELVAVDHERYNALRLTDAARPLLRGETGFHLRLERERSRSRSRRRAATPMDIP
GGIPTTLFDRLRAWRAATAKERNVPAYVVFQDATLREIAIARPRSQGELAGISGIGDRKR
EAYGDAILEIVATTG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgacaccccctccccgccgccggccaccggcggccgcgcccagcaagtcctc
gcccacgttttcggctattccgccttccgcggcgagcagcaggcgatcgtcgagcacgtc
gccgccggcagcgacgccctggtgctgatgcccaccggcggcggcaagtcgctgtgctat
cagattccggcgctgctgcgcgaaggcaccgcaatcgtggtgtcgccgctgatcgcgctg
atgcaggaccaggtcagcgcgctggtcgaagccggggtgcgggccgcgttcctcaattcc
agccaggacgccgacaccgcgcgcgcggtcgaacgcgcagcctacgtgggcgagctcgac
ctcctctacgtcgctcccgagcgcctgatgacgccgcgcttcctcgaccagctcgaccac
ctgcgcgacaccggccgcctggcgctgttcgcgatcgacgaggcacactgcgtgtcgcag
tgggggcacgacttccgccccgagtacctgcagctatcgatcctgcccgagcgctatccg
gcgattccgcgcatcgccctcaccgccaccgccgaccgccagacgcgcgaggaaatcgcc
cggcgcctgaacctcacccacgcgcgccgcttcatctccagcttcgaccgcccgaacatc
cgctacaccatcgtcgacaaggacgacccgcgccgccagctgctcgccttcatccgcgag
gaatgcccgggacaggccggcatcgtctattgcctgtcgcggcgcaaggtcgaggaaacc
gcggcgtggctgtgcgagcatggggtcaacgccctgccctaccacgccggcatgacgcag
gagctgcgcgccgggcaccagacgcgcttcctgcgcgaggacggcctggtgatggtggcg
acgatcgccttcggcatggggatcgacaagcccgacgtgcgcttcgtcgcccatctcgac
ctgccgcgctcgatcgaaggctactaccaggaaaccggccgcgccgggcgcgacggcctg
gcggcgcaggcgtggatggcgtggggcgcgcaggacgtggtccagcagcggcggatgatc
gacgaatcggaggcgagcgaggaattcaagcgcctggcgcgcaaccgcctcgaggtgctg
gtcggcctggtcgaggccacgacctgccgccgccagcacctgctcgcctacttcggcgag
gactccgccccctgcggcaactgcgacaactgcctctccccgccgcagacctgggacgcc
accgaagccgcacgtaaggccttgagctgcgtctatcgcaccggccagcgctacggcgcc
ggccacctgatcgacgtgctgcgcggcgaactgaccgacaaggtggtcgagcgcggccac
caggacatcaccaccttcggcatcggcagcgaactcgacgagaagcgctggcgcacggtg
ttccgccagctggtggcgcgcgagctggtcgccgtcgaccacgagcgctacaacgcgctg
cgcctgaccgacgccgcccgtccgctgctgcgcggcgagaccgggttccatctgcgcctg
gagcgcgagcgcagccgttcgcgcagccggcggcgcgccgctaccccgatggacatcccg
ggcggcattccgaccacgctcttcgaccgcctgcgggcgtggcgtgcggccactgcgaaa
gagcgcaacgtgcccgcctacgtggtgttccaggacgccaccttgcgcgagatcgcgatc
gcccggccacgctcgcagggcgaactggccgggatcagcggcatcggcgaccgcaagcgc
gaagcctacggcgacgcgatcctggagatcgtcgccacaaccggctga
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