Thauera chlorobenzoica: Tchl_1776
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Entry
Tchl_1776 CDS
T04612
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tchl_1776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcl03021
]
Tchl_1776
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_1776
Enzymes [BR:
tcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tchl_1776
Transcription machinery [BR:
tcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tchl_1776
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tchl_1776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
APR04630
UniProt:
A0A1L6FDA1
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All DBs
Position
1904061..1905047
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AA seq
328 aa
AA seq
DB search
MLMQSNALLKPRIIDVQSTSPVQARVTMEPFERGFGHTLGNALRRILLSSLPGHAATEVT
IEGVLHEYSTLDGVREDIVDLLLNLKGVVFKLHNRSETTLRLAKSGEGVVTAGDIEIGHD
VEIINPDHVIAHLAPGGKLDMQIKVEAGRGYVPGNARPANAESKSIGHVVLDASFGPVRR
VSYLVESARVEQRTDLDRLIIDIETNGAVDPEEAIRFAARVLMDQLSVFADLEGTPTAPQ
AAAEPKIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEKLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcaaagcaatgcactgctgaaaccgcgcatcatcgacgtccagagtacctcg
ccggtccaggcgcgggtgacgatggagccgttcgagcgcggcttcggccatacgctgggg
aatgcgctgcggcgcatcctgctgtcgtccctgccggggcatgcggctacggaagtgacg
atcgaaggcgtgcttcacgagtattcgacgctcgacggggtgcgcgaggacatcgtcgat
ctgctgctcaacctgaagggcgtggtgttcaagctgcataaccgcagcgagaccaccctg
cgtctggccaagtccggcgaaggtgtggtgactgcgggtgatatcgaaatcggtcacgac
gtcgaaatcatcaatcccgatcacgtcatcgcccatctggcgcccggcggcaagctcgac
atgcagatcaaggtcgaggccgggcggggctatgttcccggcaacgctcgtccggccaat
gccgagagcaagtcgatcggacacgtcgtgctcgacgcttcgttcggtccggtgcgccgc
gtcagctacctcgtcgaaagtgcgcgtgtcgaacagcgtaccgacctcgaccgtctgatc
atcgacatcgagaccaacggcgcggtcgatccggaagaggccatccgctttgccgcgcgt
gtgctgatggatcagctgtcggtgttcgccgatctggagggcacgcccactgcaccccag
gcggcggcggaaccgaagatcgatccggtgttgctgcgcccggtggatgacctggagctg
acggtgcgttcggcgaactgcctgaaagccgagaacatctactacatcggtgatctgatc
cagcgcaccgagaccgagctgctgaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtgttggcctcccgcgggctgacgcttggcatgaaactggaaaactggccg
ccggccgggcttgagaagctcggttga
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