KEGG   Thermomonospora curvata: Tcur_1208Help
Entry
Tcur_1208         CDS       T01127                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tcu  Thermomonospora curvata
Pathway
tcu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Tcur_1208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcu03400]
    Tcur_1208
Enzymes [BR:tcu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Tcur_1208
DNA repair and recombination proteins [BR:tcu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Tcur_1208
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ACY96791
UniProt: D1A995
LinkDB All DBs
Position
complement(1364878..1365828)
Genome map
AA seq 316 aa AA seqDB search
MLAATGDLPEDADRWCLELKWDGVRVVCHVTPHGVRAAGRRGADVTGRYPELSGLVDLVP
GREAVLDGEVVAFRHGRPSFERLQRRMHLDRPDPRLVRQVPVRYVVFDVLYLDGRPLYDL
PYLQRRQLLEELDLAGAGPFEAPPHLHAADTDQVKELVEYTWEQRLEGVVAKRVDSPYRP
GRRVDFWRKVKNFQTRDVIICGWKPGRGRREGGFGSLLLGAYDDGGALRFTGQVGTGFTD
RALEDIYERLWPLRCLTSPYDELLPRELARDAQWVEPVLVGEVAYGVWTREGHLRAPSWR
GLRDDKDPREVTYEPR
NT seq 951 nt NT seq  +upstreamnt  +downstreamnt
atgctggccgccaccggtgacctgccggaggacgccgaccgctggtgcctggagctgaag
tgggacggcgtgcgcgtcgtctgccacgtcaccccccacggcgtgcgggccgccggacgc
cgcggcgcggacgtcaccggccgctacccggagctgtccgggctggtggacctggtgccg
ggccgcgaggccgtcctcgacggcgaggtggtggccttccggcacggccggcccagcttc
gaacggctgcagcggcgcatgcacctcgatcgccccgacccccgcctggtccgccaggtg
cccgtccgctacgtggtgttcgacgtgctctacctggacggccgccccctctacgacctg
ccctacctgcagcggcggcagctgctggaggaactggacctggccggcgccggccccttc
gaggccccgccccacctgcacgccgccgacaccgaccaggtcaaggaactggtggagtac
acctgggagcagcgcctggagggcgtggtcgccaaacgggtggactccccctaccggccc
ggccggcgggtggacttctggcgcaaggtcaagaacttccagacccgcgatgtgatcatc
tgcggctggaagcccggccgcggccgccgcgagggcggcttcggctcactgctgctgggc
gcctacgacgacggcggggcgctgcgcttcaccgggcaggtcggcaccggcttcaccgac
cgggcgctggaggacatctacgagcggctgtggccgctgcgctgtctcaccagcccttat
gacgagctcctcccccgcgagctcgcccgcgacgcccagtgggttgaaccggtcctggtg
ggggaagtcgcctacggcgtgtggaccagggaggggcacctgcgcgccccgtcctggcgc
ggcctgcgcgacgacaaggacccccgggaggtcacctatgaaccccgctga

DBGET integrated database retrieval system