Hydrogenovibrio crunogenus: Tcr_1228
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Entry
Tcr_1228 CDS
T00296
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcx03009
]
Tcr_1228
Enzymes [BR:
tcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Tcr_1228
Ribosome biogenesis [BR:
tcx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tcr_1228
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABB41823
UniProt:
Q31GA0
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All DBs
Position
complement(1345752..1346705)
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AA seq
317 aa
AA seq
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MTTSSSKTTSSSKKPAGEKLQKILARGGFGSRREVEKLISQGLVKVNGKVATLGDRAFPT
DTLKVNDQLVKETRLEKQPTQVILYNKPEGQVCSRKDEKGRETIFTSLPRIINSRWISVG
RLDINTSGLLILTNNGELANRLMHPSYEMEREYSVRVFGEVSDEILDRLKKGVKLEDGFA
KFESIGKIPQQEEDSINQWYRVVIKEGRNREVRRIWESQGVQVSRLVRTRYGQFSLPRNL
RRGKSEPLTWKQINQLLKSVDLPEEPRPDLRNNPAKAKKMAARHAEPFKKETGRVKYKEK
GENHREEKSKPKSARRR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatcatcttcaaaaacaacctcttcttctaaaaagccagccggtgaaaagttg
caaaaaatattggcccgaggtgggtttggttcccggcgggaagttgaaaaactgatttca
caaggtctggtaaaagtgaatggtaaagtcgccacgctgggagatcgtgcttttccaacg
gacacccttaaagtaaacgaccagttagtcaaagaaacccgtcttgagaaacaacccacg
caggtcattctttataacaagccagaagggcaggtgtgctcacgtaaagatgaaaaaggg
cgcgaaaccatttttaccagtttgccaagaatcatcaacagtcgctggatcagtgttgga
cgcttggatatcaacacctccgggctgttgattctcaccaataacggtgagttggcaaac
cgattgatgcacccatcctatgaaatggaaagagagtattccgtgcgagtgtttggtgag
gtgtctgatgagattttggaccgccttaaaaaaggtgtcaaactggaagatggctttgcc
aagttcgaaagcattggtaagattccacaacaggaagaagactccatcaaccaatggtat
cgcgtggtgatcaaagaagggcgtaaccgtgaagtgcgtcgcatttgggaatcacagggc
gtgcaggtcagtcgtttggttcgaacgcgttatggacaattctcgttaccgcgtaatttg
cgcagaggcaaaagtgagcctttaacttggaaacaaatcaaccagctgttgaaatcggtc
gacttacctgaagagccgcgtccggacttaagaaacaacccggctaaagcgaaaaagatg
gccgccagacatgccgagccgtttaaaaaagaaactgggcgcgtcaagtacaaagaaaaa
ggtgaaaaccaccgtgaagaaaaatccaagccaaaatcggcgcgacgccgttaa
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