Thiomicrospira cyclica: Thicy_1441
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Entry
Thicy_1441 CDS
T01517
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy01501
beta-Lactam resistance
tcy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Thicy_1441
01503 Cationic antimicrobial peptide (CAMP) resistance
Thicy_1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcy03036
]
Thicy_1441
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcy02000
]
Thicy_1441
01504 Antimicrobial resistance genes [BR:
tcy01504
]
Thicy_1441
Chromosome and associated proteins [BR:
tcy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Thicy_1441
Transporters [BR:
tcy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Thicy_1441
Antimicrobial resistance genes [BR:
tcy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Thicy_1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AEG32201
UniProt:
F6DA70
LinkDB
All DBs
Position
complement(1631871..1632935)
Genome browser
AA seq
354 aa
AA seq
DB search
MSNLSGKQWLVALGLSFASLGFTSNSVANQLVIKSVVEEASVTESIMGLGEVIAKRHVEL
QPSVTERVVAVHFSDGDWVEAGQLLVTLDQAEVRAQLAELEVRLVDAERQLIRLQTLQAR
GDVSQAAVDEADLMRQTLRAQRELLNVRLSRLELRAPFAGRLGVRQVNEGAMASPGLVIT
DLIELDDVLVDFNLPARFLLDVAVGQRVLLESSLVATDNLVGEVVTVFSSLDPATRTFAV
RAKFTNADYRLLPGMGMTVRLNKTPRRLLRVPETAVVPMADQNFVYVLKPQADSELFEVE
RREVVLGAREPGWVELVSGAELGEAVISQGALRVRPGQQVKVADQLRQISEFAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttgtcaggtaaacaatggctagttgcccttgggctatcattcgcgagtctc
ggttttacatccaacagcgttgccaaccagttggtcataaaaagtgttgtcgaagaagcc
agcgtaaccgagtcgatcatgggcttgggtgaggtcattgccaagcgccatgttgaatta
cagcccagcgtaacggagcgtgtggttgcggtgcattttagcgatggtgattgggtagaa
gctgggcagttattggtgaccttggatcaagccgaggtgcgcgcgcagttagctgagctt
gaggtacgcttggtcgatgctgagcgtcaattgattcgtttacaaactttgcaggcacgc
ggtgatgtgtcgcaagcggcggttgatgaagccgacttaatgcgtcaaaccttacgagcg
caacgcgagttactgaatgtgcgtctctcgcgtcttgagttgcgtgcccctttcgcggga
cgactcggtgtgcgtcaagtgaatgagggcgctatggcgtcaccaggcctggtgattacc
gatttaattgagttagatgacgtgttggttgattttaatttacccgcgcgctttttgttg
gatgttgctgtgggccagcgagtcctgctagaaagcagtttagtggcaaccgacaattta
gtgggcgaggtggttacggtcttttcgagtcttgatccggcaacgcggacatttgcggta
cgtgctaaatttactaatgccgattatcgcttattgccaggtatgggtatgacggtgcgc
ttgaataaaacaccgcgtaggttattacgagtgcccgaaacggcggtcgtgccgatggct
gatcagaattttgtttatgtgctgaaaccacaagcggattcagagttatttgaagtagag
cgtcgagaggtggtgctaggcgcgcgagaacccggttgggttgagctggtgagtggcgct
gaattgggcgaagccgtaataagccaaggcgctttacgtgttcgacctggtcagcaggtg
aaggtggccgaccaattgcgtcaaatttctgaattcgcgcaatag
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