Thiomicrospira cyclica: Thicy_1647
Help
Entry
Thicy_1647 CDS
T01517
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcy03032
]
Thicy_1647
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_1647
Enzymes [BR:
tcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Thicy_1647
DNA replication proteins [BR:
tcy03032
]
Prokaryotic type
DNA Topoisomerases
Thicy_1647
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thicy_1647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEG32404
UniProt:
F6DBK2
LinkDB
All DBs
Position
1888908..1891343
Genome browser
AA seq
811 aa
AA seq
DB search
MSTTPIEPKQYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALAG
HCDTIKVTIHTDGSVSVTDNGRGIPVDIHEGEGVSAAEVIMTVLHAGGKFDDNSYKVSGG
LHGVGVSVVNALSEELNLTIHRHGKIWKQTYHLGVPQAPLAAMGDSDKTGTEIRFKPSSE
IFTITEYNFDYLLKRLRELSFLNSGVHIELIDKRDDRKQVFQYEGGILAFVDFINHNKTP
INAKAFHFSTVKDDITVEVAMQWSESYQESIVCFTNNIPQHDGGTHLSGFRAALTRTLNS
YIEKEGLNKKFKINVSGDDAREGLAAVISVKVPDPKFSSQTKDKLVSSEVKSAVETAMNE
KLAEYLLENPNEAKAVFAKIVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP
ALSELYLVEGDSAGGSAKQGRDRRRQAILPLKGKILNVERARFDKMISSAEVGTLITALG
CGIGPDEYNLEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQLPDLIENGYVYIAQPPLY
KVKKGKQETYLKDDAELEGYLLNSALDTAALWVNEQGPSIKEVALEQLAKQYLQVKRIIG
RLSRRYSQTLLQLLTDTPALDLALLNDYDALDEWVKTLGPRLQAIGELQKVTYNLHIEPA
LDGEAKFQIRLAQREHGTLTSQVFGEEFFMSPEYTAMAKLSETLQGLLTESAYVQRGEKQ
QPVESFTDALDWLLNEAKRGQSVQRYKGLGEMNPEQLWETTMNPETRRLLQVKVRDAIEA
DQVFTTLMGDHVEPRRDFIESNALKAENIDV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaacgcctatagaacctaagcaatacgattcttcctcgattaaagttttaaaa
ggtcttgacgctgttcgtaagcgtccaggcatgtatattggagacaccgatgatggctca
ggtctacatcatatggtgtttgaggtcgttgataacgcgattgacgaagcgcttgctggc
cattgtgacacgattaaagttaccatccacacggatggatccgtctcagttaccgataac
ggtcgaggcattcctgtcgatatacatgaaggagaaggtgtttcagccgccgaggtcatt
atgactgtactccatgccggtggtaagttcgatgataactcctataaagtgtctggtggc
ttgcacggagttggtgtttctgttgtaaacgccctttctgaagaactgaacctaaccatc
catcgccacggtaaaatatggaaacaaacctaccacttaggtgtgccacaagcccctcta
gcggctatgggtgattccgacaaaaccggtactgaaattcgctttaaacccagtagtgaa
atttttaccatcaccgaatacaattttgattacctactaaagagactacgtgagttgtct
tttctaaactcaggcgttcatattgagctgattgataaacgagacgatcgaaaacaagtc
ttccaatatgaaggcggtattttggcgtttgtcgattttattaatcacaataaaacccca
atcaatgcaaaagccttccatttctcaacggtaaaggatgacattaccgttgaagttgcc
atgcaatggtctgagtcttatcaagagtcgattgtttgctttaccaataatattcctcag
cacgatggcggaactcatttatctggcttccgcgccgcactgactcgaacgctaaacagt
tatattgagaaagaaggcttaaataaaaagtttaaaatcaacgtgtctggcgacgatgcg
cgtgaaggacttgctgcggttatttcggtgaaagtaccagatccaaaattctcttcacag
accaaagacaagttagtgtcttctgaagtaaagtcagcagttgaaaccgcgatgaatgaa
aaactggctgaatacttgttagaaaaccccaacgaagccaaagcggtttttgccaagatt
gttgatgcggcacgtgcgcgtgaagcggcacgaaaagcgcgcgaaatgactcgccgcaaa
ggggctttggatatcgcaggcctgccaggtaaattggcggattgccaagaaaaagatccc
gcgttgagtgaactttatctagtggagggtgattccgcaggaggttcagctaagcaagga
cgtgatcgtcgtcgccaagctattttgccactaaaaggtaaaatccttaacgtcgaacgc
gctcgttttgacaagatgatctcatcagcggaagtaggcacgctcataaccgcactaggt
tgcggtattgggcctgacgaatataatctcgaaaaactacgctatcatcgcatcattatt
atgaccgatgctgacgtagacggttcgcatattcgtacgcttctattaacctttttctat
cgtcaactacccgatttaattgaaaatggctatgtgtatattgctcagccaccactctac
aaagtaaaaaaaggcaaacaagaaacctatttaaaagacgatgccgagctagaaggctac
cttcttaatagtgccttagatacagcggcactttgggtcaacgagcaaggtcccagcatt
aaagaagtcgcattagaacagctcgctaaacaatatctacaagttaaacggattattggt
cgtttatcgcgtcgatatagtcaaaccttattgcaattattaactgacacaccggcattg
gacctagcgctgctcaacgactatgatgcattagatgaatgggttaaaacactcggaccg
cgtttacaagcaatcggtgagcttcaaaaagtgacgtataaccttcatattgaaccggct
ctcgatggtgaggcaaagttccaaattcgcctagcgcaacgtgaacatggcactttaaca
agccaagtcttcggtgaagagttctttatgtctccagaatatacagccatggctaaactt
agtgaaacacttcagggtttactaactgagtcagcttacgtccaacggggtgaaaaacaa
caacccgtggaatcatttaccgatgctctagactggttgctcaatgaagctaaacgtggt
caaagtgttcaacgctataaaggtctgggggagatgaaccccgaacagctttgggaaacg
accatgaatcccgaaactcgccgcttgctgcaagtcaaagtacgagacgctatagaagcc
gatcaggtctttacaacgctaatgggcgaccacgttgaaccgcgacgcgactttatcgaa
agtaacgcgcttaaagcggaaaatattgatgtttaa
DBGET
integrated database retrieval system
