Sulfurimonas denitrificans: Suden_1835
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Entry
Suden_1835 CDS
T00298
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tdn
Sulfurimonas denitrificans
Pathway
tdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Suden_1835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdn03400
]
Suden_1835
Enzymes [BR:
tdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Suden_1835
DNA repair and recombination proteins [BR:
tdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Suden_1835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABB45109
UniProt:
Q30PH2
LinkDB
All DBs
Position
complement(1918311..1919156)
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AA seq
281 aa
AA seq
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MSKFVGAHVSASGGVFNAVENAQKIGAKAFALFTKNQRQWSAKEFDSETIDKFKTALEKS
GILPRHVLPHDSYLINLGHPELDAREKSLDAFLDEVQRCSLLGLDRLNFHPGSHLKKISE
DECLANISESMNRVLDKTSGVSLVIENTAGQGSNLGWKFEHLAQIIDKVEDKSRVGVCID
TCHMFSAGYDIRTREAYDKSWGEFDKIVGFKYLMGMHINDSKAKFGSHVDRHNSLGVGEI
GLDTFKFIMNDERMDDIPLILETIDDSIWAQEIRLLYSFVN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttgtaggagcacatgtaagtgcgagtggcggagtttttaatgcggttgaa
aatgcacaaaagataggggcaaaagcgtttgcgctatttactaaaaatcagaggcagtgg
agtgcaaaagagtttgatagtgaaactatagataaatttaaaacagcattagaaaaaagc
ggaattttgcctcgccatgtacttcctcatgactcttatcttataaatcttgggcatcca
gagcttgatgcgagagaaaaatcattagacgcatttttggatgaagtgcaaagatgctct
cttttagggcttgatagattaaattttcacccaggaagccatctaaagaagataagtgaa
gatgagtgtttggcaaatatatctgaatctatgaatagggttttagataaaacaagcggt
gtcagtttggttatagagaatactgcaggacagggaagcaaccttggttggaagtttgag
cacctagcgcagataatcgacaaagtagaagataaaagtcgtgtgggagtctgcatagat
acatgtcatatgtttagcgcagggtatgacataagaacaagagaagcttacgataagagt
tggggtgagtttgataaaatagtgggtttcaaatatcttatgggcatgcacataaacgac
tcaaaggcaaagtttggctcacatgtagatagacataactctttaggagtcggcgaaatc
ggtcttgatacttttaaatttataatgaatgacgaaagaatggatgatattcctcttatt
cttgaaaccattgatgatagtatatgggctcaagagattaggctactttattcgtttgta
aattaa
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