Nostocoides sp. HKS02: GKE56_10240
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Entry
GKE56_10240 CDS
T06295
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GKE56_10240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
teh03021
]
GKE56_10240
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_10240
Enzymes [BR:
teh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GKE56_10240
Transcription machinery [BR:
teh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GKE56_10240
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GKE56_10240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QGN58202
UniProt:
A0A6I5X7S1
LinkDB
All DBs
Position
complement(2148579..2149631)
Genome browser
AA seq
350 aa
AA seq
DB search
MLIAQRPTLSEEVVAENRSRFAIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRVDGVL
HEFSTIPGVKEDVTEIILNIKGLVVSSEHDEPVVMYLRKTGAGAVTAADIAPPAGVEVHN
PDLHIATLNGKGKVEMELTVERGRGYVSAQQNKSGDQEIGRIPVDSIYSPVLAVTYKVEA
TRVEQRTDFDKLIVDVETKNSMAPRDAMASAGKTLVELFGLARELNVEAEGIDMGPSPTD
AALAADLALPIEDLDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKAK
LVGMGLALKDSPPGFDPSAIADNYGDYDDEFADTADSADDGRSLAEDEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctcagcgaagaggtcgttgcggagaaccgcagccgc
ttcgccatcgagcccctcgagcccggcttcggctacacgctcggcaactccctgcgccgc
accctgctctccagcatccccggcgcctcggtcaccagcatccgcgtcgacggcgtgctg
cacgagttctccacgatccccggggtcaaggaggacgtcaccgagatcatcctcaacatc
aagggtctcgtcgtctcctccgagcacgacgagccggtcgtgatgtacctgcgcaagacc
ggcgccggcgctgtcacggctgccgacatcgcccccccggctggcgtcgaggtgcacaac
cctgacctgcacatcgccacgctcaacggcaagggcaaggtcgagatggagctgaccgtc
gagcgcggtcgcggctacgtctcggcccagcagaacaagtccggcgaccaggagatcggc
cgtatcccggtcgactccatctacagcccggtgctggccgtgacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctcatcgtcgatgtcgagaccaagaac
tcgatggctccccgcgacgccatggcctcggccggcaagaccctcgtcgagctgttcgga
ctggcccgtgagctcaacgtcgaggccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggacctcgacctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtgggccgcagcgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggccaag
ctcgtgggcatgggtctggcgctcaaggacagcccgcccgggttcgacccgagcgcgatc
gccgacaactacggcgactacgacgacgagttcgctgacaccgccgactctgccgacgac
ggccgctcgctggccgaggacgagcagctctga
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