Nostocoides sp. HKS02: GKE56_16780
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Entry
GKE56_16780 CDS
T06295
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
teh
Nostocoides sp. HKS02
Pathway
teh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
teh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKE56_16780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teh03400
]
GKE56_16780
Enzymes [BR:
teh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GKE56_16780
DNA repair and recombination proteins [BR:
teh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKE56_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGN59271
UniProt:
A0A6I5XB63
LinkDB
All DBs
Position
complement(3481302..3482123)
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AA seq
273 aa
AA seq
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MSCEHPVTGQRFDSPVPAGTGWPGDPATPTTPVALTPDQVSSLARSVDSVAELDARISVC
RACPRLVQWREAVATSGRRASFAEQPYWGRPGPGFGDPTAERLIVGLAPAANGTNRTGRM
FTGDRSGDWLYAALFRAGYATQPDSWASGDGLELRGIRIVATVRCAPPANKPTLAEKAAC
APWLDRDLELAAPRLRSVLALGSIAWDATLGAARRLGWAVPRPKPRFGHGVEVALTAPDG
REVRLVGSYHVSQQNTFTGKLTEAMLDAAIARL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcgagcacccggtgaccggccaacggttcgactcgccggtccccgcaggcacg
gggtggccgggcgaccccgctaccccgacgactccggtggccctcacgccggaccaggtc
agctcgctggctcggtcggtcgactcggtcgccgagctcgacgcgcggatcagcgtctgc
cgcgcgtgcccgcgcctggtccagtggcgcgaggcggtcgccacgagtggacggcgtgcc
tccttcgccgagcagccgtactgggggcgcccgggcccggggttcggcgacccgacggcc
gagcgcctcatcgtggggctggcgcctgccgcgaacggcaccaaccgcaccgggcgcatg
ttcaccggcgaccgttcgggcgactggctgtatgccgcgctgttccgtgccgggtacgcc
acccagcccgactcgtgggcgagcggcgacgggctggagctgcgcggcatacggatcgtg
gcgacggtgcgctgcgctcccccggccaacaagcccaccctggccgagaaggccgcctgc
gccccgtggctggaccgcgacctcgagctggccgcaccgcgcctgcgctcggtgctggcg
ctcgggtccatcgcctgggacgcgacgttgggcgccgcccgccgactgggctgggcggtc
ccgcgacccaaaccgcggttcggccacggcgtcgaggttgccttgaccgcgcccgacggg
cgcgaggtgcggctcgtcggcagctaccacgtcagccagcagaacaccttcaccggcaag
ctcaccgaggcgatgctcgacgccgcgatcgcccggctctag
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