Toxoplasma gondii: TGME49_309800
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Entry
TGME49_309800 CDS
T01093
Name
(RefSeq) RNA recognition motif-containing protein
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_309800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_309800
Spliceosome [BR:
tgo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
TGME49_309800
Complex B
TGME49_309800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Picorna_P3A
Motif
Other DBs
NCBI-GeneID:
7900433
NCBI-ProteinID:
XP_002364227
UniProt:
A0A125YM05
LinkDB
All DBs
Position
XI:complement(join(822207..822265,822482..822665,822934..823043,823838..823922,824225..824386,824790..824880,825340..825421,825877..826261))
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AA seq
385 aa
AA seq
DB search
MHIPFGAGAPPPGGPAGGPPAGMPPPGGPGGSFPPDFLPMMPGPGIPSGGPGGMPGPRIL
PAAGGPSFPPLMPPPAMGMLMPEMTIGPMGLPGMVRKPKNMQPPTQDMSIPPNQTIYINN
INDKVKLPELKENLRSMFKQFGEIRQIVAMSSFWRRGQAWIVFASVESATKAIQGMQGFV
YHDQPLRINYSVTKSDIIAKEDGTFTPRPPGPKKPRAIREREERQRELFLQMQQQYMQMQ
ASSNAAATTGAAPSAPGNLSQGQANLETMGVLKRKAEGALPTPQPAKLGGPFPPAAPVPP
PAVDMNFPAMPNKVLFLENLPEDATMEGLVSLFSKHAGMIEVRPVLWRRVAFVEYDNEML
AANAMNALQGYNMNGSSIKITYARR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcacattccgttcggcgcgggagccccgccccccgggggcccagcaggaggcccgccc
gccggcatgcctccccctggcggccccgggggctcttttcctccggactttctaccgatg
atgcctgggcctggaatcccctctggaggccctgggggaatgcctgggccccgcattctc
ccggcggcaggaggccccagtttcccacccctgatgcccccccctgcgatgggcatgctt
atgcccgagatgacgatcggtcctatgggcctcccgggcatggtgcggaagccgaagaat
atgcaaccgcccacccaagatatgagtattcccccgaatcaaaccatctacatcaacaat
atcaacgacaaagtcaagctcccagaactcaaagaaaatcttcgtagcatgttcaagcag
tttggagaaattcggcaaatcgtcgcaatgagttctttctggcgccggggacaggcttgg
attgtctttgcgagtgtggaatctgcgacgaaggccattcaaggcatgcagggtttcgtc
tatcacgaccagccattgcgcatcaattacagtgtcaccaagagcgacatcattgcgaag
gaagacggcacgttcacaccgcgacctcctggccccaagaagcctcgagcaattcgcgag
agagaagagagacagcgagaacttttcctccaaatgcaacaacagtacatgcaaatgcag
gcgagttcgaatgcggcggcgacgacgggagcggcgccgagcgcgcctggaaatctgtcg
caaggacaggcgaacctggagacaatgggtgtcctaaagagaaaggcagagggtgcactt
cccactcctcagcctgcgaaactcggcggccctttcccgcctgcggcaccagttcccccg
ccggcagttgacatgaacttcccggcaatgcccaataaggttttatttctcgagaatttg
cctgaagatgcaacgatggaaggtctcgtcagcctcttttctaaacacgcgggaatgatt
gaggttcgccccgtcctctggcgccgcgtggctttcgttgagtacgataacgaaatgctt
gcagcaaacgccatgaatgctctccaagggtacaacatgaacgggtcgtcgatcaagatt
acatatgcaagaagataa
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