KEGG   Toxoplasma gondii: TGME49_312280
Entry
TGME49_312280     CDS       T01093                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase, putative
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_312280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgo03041]
    TGME49_312280
Spliceosome [BR:tgo03041]
 Complex C
  Other components
   Step II factors
    TGME49_312280
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N Helicase_C AAA_22 DEAD S1 nSTAND3 PhoH AAA_19 Microtub_bd T2SSE AAA_16
Other DBs
NCBI-GeneID: 7895755
NCBI-ProteinID: XP_002364450
UniProt: A0A125YKC6
LinkDB
Position
XI:join(2561384..2562240,2562847..2562986,2563559..2563700,2563998..2564397,2564787..2564982,2565450..2565781,2566899..2567343,2568325..2568459,2569002..2569174,2569956..2570165,2571304..2571441,2571929..2572034,2572357..2572595,2572917..2573024)
AA seq 1206 aa
MDVLERLSVISRITTELHNHWGVNDRDLAEFVVHLGEEASSLDEFREQLQENGAAVSTSL
AVSLYTTIQKLSQKKRAASKKEAGARDLSGKGEKKSAASTSASSSSFCSSASSASEASRE
PAFPDHHELTEKEKKFPGLCMPNDFSRPELQLERPDDHAPLSEHAQRLLNAEKDEKELQK
EQKEALKRGRENKFAPIQTGANSIPLGGKKRDGEAERAGEKKAGSAPAHYYGRKGPMIRY
AIYEGVVEKVVEFGCFVRLEFDEGTRQGLLHVADMIKTDGRPIQPQDVVHRNMVVKVKIL
GIAGTKISLSMREVDQETGEDLKPRGEFARKEEDTAGEKKKIRIDDEAEEREKQGIGRLT
GIRIDSKDNNVESLYCRKRKLMSDFDKWEAQQLLHSGLLTREEHPLFDEELGILPSAEVD
EDVEVEIREDEALFLRGQTTRTGMQLSPVKIVANPDGSLARAAATATALAKERREIRNAQ
EAAILDSIPKDMSRPWEDPAPGPGERTIAQALKGLGQTSYEMPEWKKMYIGKSVSFGQKS
NKSIAEQRQSLPIYRLREPLLKAIKENQVLIVIGETGSGKTTQMTQYLAEEGLVPPGTMI
GCTQPRRVAAISVAKRVAEEFGCRVGQEVGYNIRFEDCTSPDTIIKYMTDGMLLREALVD
ASLKRYCVVMLDEAHERTISTDVLFGLLKDCCRRRPDFKLIVTSATLDAEKFSNYFFNSH
IFTIPGRTFPVEILYTKEPEADYVEASLITVLQIHLCEPPGDILLFLTGQEEIDTACQTL
HERMQKLESTNPPPLIILPVYSALPSEMQTMIFDPAPPGCRKCVVATNIAEASLTIDGIY
FVIDPGFAKMKMYNPKTGMDSLVVAPISQANARQRAGRAGRTGPGKCYRLYTEQAYRCEM
LPVAVPEIQRTNLENTVLLLKAMGVNDMLNFDFMDPPPVQTLINALESLYELGALDDEGL
LTRLGRKMAEFPMEPQLSKMLLASVDLKCSDEIITIVSMLSVQNVFYRPKDKQAMSDQRK
SCFHQPEGDHVTYLEIYRGWQRNRFSNSWCFENFIQSRAMRRAQDVRKQLITIMDRYKLD
VISAGKDYNRIRRCICAGYFRHACRRDPQEGYRTLVDHTQVFLHPSSALYNRHPEWLIYH
ELVLTTREYLRDCCTIEPQWLVEVAPKLFKLADQQRLSRRKMRERIEPLYDRFAEPNAWR
LSKRRG
NT seq 3621 nt   +upstreamnt  +downstreamnt
atggatgtccttgaacgcctgagcgtcatctcccgcattaccacagagctccacaaccac
tggggagtgaacgaccgcgatttggccgagttcgttgtgcatctgggagaagaggcttct
tcgctggacgagtttcgcgagcaacttcaggagaatggagcagcggtctccacgtctctc
gccgtctcgctctacacgacgattcagaagctgtctcagaagaagcgagcagcctcgaaa
aaagaggcaggcgcgcgagatctctcgggaaagggagaaaagaagagcgcagcctccacc
tctgcttcttcctcttctttctgttcttctgcctcctctgcttccgaggcctcccgagag
ccagcgttccctgatcaccatgagttgacagagaaggagaaaaagttccctggcttgtgc
atgccgaacgatttctcgcgaccggagcttcaactcgagcgtcccgacgatcacgcgcct
ctctccgaacatgcgcagcggctgctgaatgctgagaaggacgagaaagagctgcagaag
gaacagaaggaggcgctcaagcgaggccgcgagaacaagttcgcgcccatccagacaggc
gccaacagcatccctttgggaggaaagaaacgcgacggagaggcagagcgcgctggagag
aagaaggcaggtagtgcccctgcacactactacggcaggaaaggacctatgattcgctat
gcgatttacgaaggagttgttgaaaaagttgtcgaatttggctgctttgtccgccttgaa
ttcgacgaaggcactcgacagggtctcctccacgtcgccgatatgatcaaaaccgatggc
cgccccatccagccgcaggacgttgtgcaccggaacatggtggtgaaagtgaagattctt
ggtattgccggcacgaaaatttccctgtcgatgcgcgaagtcgaccaggagactggcgag
gacttgaagcctcgaggcgaattcgccagaaaagaagaggacaccgctggcgagaagaag
aagattcgcatcgacgacgaagccgaggagagagaaaaacaaggcattgggcgtctgacc
ggaattcgcattgattcgaaagacaacaacgttgagtccctttactgtcgaaagcgcaaa
cttatgagcgacttcgacaaatgggaggcgcagcaacttctgcacagtggtctgttgacg
cgcgaagaacatccgttgtttgatgaggaacttgggatccttccctcagccgaagtcgac
gaagacgtagaagttgagattcgcgaagacgaggcgctcttccttcgaggccagacaacg
cgcacgggcatgcagttgagtccggtgaagattgtggcgaatcctgatgggtcgcttgcg
cgagccgccgccactgccactgcgctggcgaaagaaagaagagaaatacgcaatgctcaa
gaagctgcaatcctcgattcgattcctaaagacatgagcagaccttgggaagacccggct
cctggacctggcgaacgtaccatcgctcaagccttaaagggtctagggcagacaagttac
gaaatgccagagtggaagaagatgtacattggaaagagcgtcagctttggccagaaaagc
aacaagagcattgccgaacagagacaaagcctcccgatctatcgcctcagagagcctctg
ttgaaagctatcaaagaaaatcaagttctcattgtcattggagaaacaggaagtgggaaa
acgacgcagatgacgcagtatctcgcggaagaaggcctcgtacctcccggaacgatgata
ggatgcacacagccgcgtcgagtcgctgcgatctcggttgcgaagcgtgtggcggaagag
ttcggctgtcgagttggacaggaagttggatacaacattcgtttcgaggactgcacaagt
cccgacacaatcatcaaatacatgacagacggcatgctcctcagagaggctctcgtcgac
gcctcgctcaaacgctactgcgtcgtcatgctcgacgaagctcacgaaagaacaatcagc
acagatgtcctcttcggccttctcaaggactgttgtcggcgacggccggacttcaagctg
attgtgacgtctgcgactttggatgcggagaaattctcgaattactttttcaactcccat
attttcaccattccagggcggactttccctgtggagatcctctacaccaaagagcctgag
gcggactacgtcgaggcgtcgctgattacggtgttgcagattcacctctgcgaacctccg
ggggacattctgcttttcctcacagggcaggaagaaattgacactgcatgccagactctg
catgagcgcatgcagaagctcgagagcacgaatcccccgcctctcatcattcttcccgtc
tactctgccctgccgtcggaaatgcaaacgatgatcttcgatcccgcgcctcctggatgc
cggaagtgcgtcgtcgcgacgaacatcgctgaggcttctctgaccattgacggaatctac
ttcgtcatcgatccaggatttgcgaaaatgaaaatgtacaatcccaagacagggatggac
agtcttgttgtcgcccctatcagccaagcgaatgctcgccagagagcaggccgagctgga
cgcacagggccggggaagtgctaccgtctgtacaccgaacaggcgtaccggtgcgagatg
ttgcctgtggcagtccctgagattcagcgaacgaatctggaaaatacggtgctgcttctg
aaagccatgggtgtcaacgacatgctaaacttcgacttcatggaccctccacctgttcag
accttgatcaacgcgctggagagtttgtacgagctgggcgctttggacgacgaaggcttg
ctgacgcgcctgggccggaaaatggccgagttccccatggagcctcaactgagcaagatg
ctcttggcaagcgtcgatctcaagtgcagcgatgaaattatcacaatcgtctccatgctg
agcgtgcagaacgtcttctacagacccaaagacaagcaagcaatgtcggatcagcgcaag
agctgtttccaccagcctgagggcgaccatgtgacctacttggaaatctatcgaggctgg
caacgcaatcgcttctccaattcttggtgttttgagaacttcattcagagtcgcgctatg
cgtcgagctcaggatgtccgcaagcagctcatcacgattatggatcgatacaagctcgat
gtgatctccgccggcaaagactacaataggattcgacgctgcatctgcgccggatacttc
agacacgcatgccgccgggatcctcaggaaggctatcgaacgcttgtcgatcacacacaa
gttttcctccatccctccagcgcgctgtacaaccgtcaccctgagtggctgatctaccac
gaactcgttctcacaacgcgcgaatatctccgggactgctgcacaatcgaacctcagtgg
cttgtcgaagtcgcccccaaactgttcaaattggcggaccagcagcgcctgtcgaggagg
aaaatgcgcgaacgcatcgagccactgtacgacagattcgcggagcctaatgcatggcgt
ctgtcgaagcgacgaggctga

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