KEGG   Taeniopygia guttata (zebra finch): 100190618
Entry
100190618         CDS       T01082                                 
Symbol
SNRPB
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100190618 (SNRPB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100190618 (SNRPB)
   03041 Spliceosome [BR:tgu03041]
    100190618 (SNRPB)
   03032 DNA replication proteins [BR:tgu03032]
    100190618 (SNRPB)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     100190618 (SNRPB)
Spliceosome [BR:tgu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    100190618 (SNRPB)
  U2 snRNP components
    100190618 (SNRPB)
 Complex B
  U1 snRNP components
    100190618 (SNRPB)
  U4/U6.U5 tri-snRNP components
    100190618 (SNRPB)
 Complex C
  U2 snRNP components
    100190618 (SNRPB)
DNA replication proteins [BR:tgu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     100190618 (SNRPB)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 100190618
NCBI-ProteinID: NP_001232486
UniProt: B5G4G2
LinkDB
Position
20:complement(6936265..6938648)
AA seq 240 aa
MTVGKSSKMLQHIDYRMRCILQDGRVFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGTPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYTPGRGGPPPPMS
RGAPPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq 723 nt   +upstreamnt  +downstreamnt
atgacggtggggaagagcagcaagatgctgcagcacatcgactaccgcatgcggtgcatc
ctgcaggacgggcgcgtcttcatcggcacgttcaaggcctttgataagcacatgaacctc
atcctctgcgactgcgacgagttccgcaagatcaaacctaaaaattcaaaacagccagag
cgggaagagaaacgggtccttggccttgtgttgctgcgaggggaaaatctggtgtccatg
acggttgaaggacctcctccaaaggatactggaattgcccgggtacccctcgctggagct
gctggaggacctggtgttgggagagcagcagggaggggagtaccagctggcactcccatg
ccacaagctcctgcaggattagctggccctgtcagaggagtgggaggaccatcccaacag
gtaatgacaccccagggtcgtggaacagttgcagctgctgctgcagcagccactgccagc
atagcaggagccccaactcagtacacaccagggcgtgggggtcctcccccacccatgagc
agaggagcccctcctccaggaatgatgggacctccaccaggcatgagaccaccaatgggc
ccccccatgggaatgccacctggccgaggggctccgatgggaatgccccccccaggcatg
agaccaccacccccaggaatgagaggaccccctccacctggcatgcgccccccaaggccg
tga

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