Taeniopygia guttata (zebra finch): 100219296
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Entry
100219296 CDS
T01082
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100219296 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100219296 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100219296 (USP5)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100219296 (USP5)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100219296 (USP5)
Ubiquitin system [BR:
tgu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100219296 (USP5)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100219296 (USP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
100219296
NCBI-ProteinID:
XP_030123112
Ensembl:
ENSTGUG00000013294
LinkDB
All DBs
Position
1:26748593..26763370
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AA seq
855 aa
AA seq
DB search
MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVEKH
YQKTGQRVYLHLKRTRKPKEEDTNSSAGDPPRKKPTRLAIGVEGGFDITEEKFEYDEDVK
IVILPDHLDIPRDGLEGLPDMVKDRIASAIEAILTADSASRKQEVQAWDGEVRRVSKHAF
SLHQLQNDVRIPPCGWKCSKCDMKENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETG
YPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMN
QRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYVDKLEKI
FQSAPSDPTQDFSTQVAKLGHGLLSGEYSRPASADGEQQSDQKGMQNGIAPRMFKSLIGK
GHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRV
DYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVD
DFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISALQ
GTGLQEGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVIIQL
VEMGFPMDACRKAVYYTGNSGVEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPP
SEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAES
ISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGRWVIYNDQKVCASEKP
PKDLGYIYFYQRIPS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagcgaggcgctgctgtcggtgttgccgtccatccgggtgcccaaggcc
ggcgaccgcgtccacaaggacgagtgcgccttctccttcgacacgccggagtcagatggc
ggcttgtatatctgcatgaacacgttcctgggctttgggaaacagtatgtggaaaagcac
tatcagaaaacaggccagcgggtctacctgcacctcaaaagaacacgtaaaccgaaggaa
gaagacaccaactccagtgctggggaccccccgaggaagaaaccaacccgcttggctatt
ggtgtagaaggtggatttgacatcacagaagaaaagtttgaatatgacgaagatgtaaaa
atagtaattttgccggaccatttggatattccacgtgatgggctagagggactaccagac
atggtgaaagacaggattgccagtgcgattgaggccatcctgacagcagattcagcctca
cggaagcaggaggtgcaggcttgggatggggaggttcgacgtgtttccaaacacgccttt
tccctgcaccagcttcagaacgatgtccgcatcccaccgtgtggctggaagtgcagcaag
tgtgacatgaaggagaacctgtggctgaacatgaccgatggagccatcctctgtggtcgg
cgctacttcgatggcagtggtggcaacaaccacgcggtcgagcactaccgagaaaccggc
tacccgctggctgtgaaactgggaacaattactcctgatggggctgatgtctactcctat
gatgaggatgacatggtgttggatcccaacctggcagaacacctagcacactttgggatt
gacatgcttaagatgcagaagacagacaagacaatgacagaactggaaatagacatgaac
cagcgcattggcgagtgggagctgatccaggagtctggcgttcaactcaaacccctctat
gggcctgggtacactggtatccgtaacctgggcaacagttgctacctcaattctgtgatg
caggtgctgttcagtatcccagacttccagagaaagtatgtggacaagctggagaagata
ttccaaagtgcaccttcagaccccacacaggatttcagcacacaagtagccaaactgggc
catggactgctttctggggagtattcgaggccagcttctgcagatggggagcaacagtct
gatcagaagggtatgcaaaatggcattgctccacgcatgtttaagtccctcattggaaag
gggcacccagaattttccactaaccgacagcaggatgcccaggaattctttctgcacttc
atcaacatggtggagaggaactgccgcagctcggagaaccctaacgaggtcttccgtttt
ctggtggaggagaagctgaagtgcctggccacagaaaaggtgaaatacacccagcgtgtg
gactacattatgcagctgcctgtgcccatggatgctgcactcaacaaagatgaactgctg
gaatatgaggagaagaagaggcaggcagaggaagagaagcagcctctgcctgagctggtg
cgagccaaggtgcctttcagctcctgcctagaggcctatggagctccagagcaggtggat
gatttctggagcacagccttgcaggccaagtctgtggctctcaaaacaacacggttcgcc
tctttcccagactatctggtcatccagatcaagaagttcacctttggtctggactgggtg
cccaaaaaactcgatgtttccattgaaatgccagaggagctggatatctctgcactgcag
ggaacggggctgcaggaaggagaggaagaaatgccagacatcgcacccccactggtgaca
ccagatgagcccaaaggtagcctggggttctatggcaacgaggacgacgactccttctgc
tcccctcacttctcctctccgacatcacccatgctggatgagtcggtgattatccagcta
gtggaaatgggctttcccatggatgcctgccgcaaagccgtgtattacacagggaatagt
ggggttgaggcggccatgaactgggtcatgtcacatatggatgatccagactttgctaac
ccattagttctccctggatccagtgggccagggtcaactattgcctgcccagaccctcct
tcggaagacagtgtggccaccattgtctccatgggcttctcccgggaccaggcaatgaaa
gcgcttagagccacgaacaacagtctggagcgtgctgtggattggatctttagtcacatc
gatgacctcgatgcagaagctgctatggatatctcagaggggcgctcggcagctgagtcc
atctctgaatccgtccctgtgggtcccaaagtgcgcgatgggcctggaaaatatcagctg
tttgccttcatcagccacatgggcacttcaactatgtgtggacattatgtttgtcacatc
aagaaagatggcaggtgggtgatctacaacgaccagaaagtctgtgcttctgagaagccc
cccaaggacctgggctacatctacttctatcagcggattcccagctag
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