Taeniopygia guttata (zebra finch): 100219625
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Entry
100219625 CDS
T01082
Symbol
LAMC3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04510
Focal adhesion
tgu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100219625 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100219625 (LAMC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Alpha-2-MRAP_C
CdaS_N
DUF4559
Motif
Other DBs
NCBI-GeneID:
100219625
NCBI-ProteinID:
XP_030142551
Ensembl:
ENSTGUG00000004775
LinkDB
All DBs
Position
17:6624949..6643374
Genome browser
AA seq
1574 aa
AA seq
DB search
MAQPPGLCLLALLGLGLGGSSPCQDPRGQPRRCMPDFENAAFGRAVQVSNTCGSPPEDFC
LHTGGQHASALCHRCDATDPRRHHNASFLTDFHSQEESTWWQSQSMAFGIQYPNSVNITL
RLGKAYEITYVRLKFHTSRPESFAIYKRSRAEGPWVPFQFYSASCQKTYGKRPRQYLRPG
EDEQVAFCSDEFSDISPLSGGNVAFSTLEGRPSAYNFDGSPALQEWVTVTDLLISLNRLN
TFGDDIFKDPKVLQSYYYAISDFSVGGRCKCNGHASECAPDEAGQLVCVCQHHTAGTDCQ
RCQPFYQDRPWARGTAEAAHECLPCNCSGRSEECFYDRELFRRTGHGGHCLNCRDNTAGP
HCESCRQNYYRWEPQGTCQPCHCHPAGSLQPQCDNSGTCVCKANVTGWKCERCKDGYHSL
SEGGCRPCACDPAGSVGTCDPTTGHCTCKDRVEGHLCNRCQPGWFNLQPHNPIGCTSCFC
YGHSSACRAADGYEETYILSDFSQGLEGWAATAPGTTDLPLRWAGREIIAEWDGEESVDF
LAPEKFLQNQRLSYGQLLSLLLGVENGTRTESGVPLLQVQLLLEGEGMEITMSSSKSQLQ
HGKQAVTFRLHEAEEGAEPLLSAFSFQRLLSNLTSLRLRVGGPVRGRLSLSEVQLTSARP
GPGTRAGWVEECTCPMGYTGQFCQSCAPGFKREIPFGGPFISCVPCTCNQHGDCHPLTGL
CQCLHNTEGPFCERCSPGFYGNPFAGRSDDCKPCPCPGRSPCTEVPSTGEVVCTHCPPGQ
RGKRCELCDDGFFGDPLGQRGPVHPCEPCQCHGNVDLNAVGNCDPVSGRCLRCLYNTMGD
HCERCRPGFYGDALAPSPAGKCAPCDCNPSGSDPRMEGCDPGTGQCHCLPHVTGRACGQC
QPGYYGLEPTVGCKSCECHPTGSRESGCHVLTGQCSCQPGVTGKKCDQCQHGFFGFSARG
CRACNCSPLGSVTPQCHENSTCLCHPGFVGYKCDRCQANFFLEPLSSRCQQCPACYGLVK
DEAERLKARLQEMEEWLQKPGCDTRPGQSAMLGDAPRGDGLPSPHLLRGAWATLLVQVGQ
LAGALNTARGRLTNASRATRCSDHGPPKTCTLLSEIGAVLQSAQQELLHAADTLAATEIP
QEIPQQPTNWSHWALEAQALSKSHKESMAQVEAVVRRALRASNASSELLQDLLEGNATRD
VQHELEAGYEEIQRAQEELGAGMAEVAVGARRAVTAVEQAHADLAERLLQVAALGQQVLP
VQAADLAQELAVLEQAAAAQEPLAQRAVEASRTLAAGLQLELQRTHSFKQLRDQAGSAHD
MATMAVSRGKAVLSDAESLLASLEGMKKVLGHQKSQAALRRRMAAVRDRVMVDAQRKIKQ
AEKTLGNSLSISTTAQRTAGEAEQISEGSAKRARAVLQESKQALKHASQLSTRANETQWE
LSRQEHMAEKLRADLEEAQQVGSEVSEMAKSLQEARGSLMSDIETLNNLLNSLGNLEQDT
EVDAVLSAGRLQLEQLWLRLATPGALARQLSRLQQEAAQQQEKIQAFESDLAEIRADKQN
LEDILRSLPESCSK
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctcccgggctctgcctgctggccctgctggggctggggctggggggctca
tccccctgccaggaccctcgggggcagccccgccgctgcatgcccgacttcgagaacgcc
gccttcggccgggccgtgcaggtcagcaacacctgcgggtcccccccggaggatttctgc
ctgcacacgggcggccagcacgccagcgccctgtgccaccgctgcgatgccaccgacccc
cggcgtcaccacaacgcctccttcctcaccgatttccacagccaggaggagagcacctgg
tggcagagccagtccatggcctttggcatccagtaccccaactccgtcaacatcaccctg
cgcctgggcaaagcctacgagatcacctacgtgcggctgaagttccacaccagccgcccc
gagagcttcgccatctacaagcgcagccgcgccgaggggccctgggtgcccttccagttc
tacagcgcgtcctgccagaagacctacgggaagcggccgcggcagtacctgcggccaggc
gaggacgagcaggtggccttctgcagcgacgagttcagcgacatctccccgctgagcggg
ggcaacgtggccttctccaccctggagggacggcccagcgcctacaattttgatggaagc
cccgcgctgcaggagtgggtgacagtcactgacctgctcatctctttgaaccggctcaac
acatttggggatgacatcttcaaggaccccaaggtgttgcagtcatactactatgccata
tctgacttctccgttggtggcaggtgcaaatgcaatggccacgccagcgagtgcgcgccg
gacgaggccgggcagctggtgtgtgtgtgccagcaccacacggctggcaccgactgccag
cgctgccagcccttctaccaggaccggccctgggcgcgcggcacggccgaggctgcccac
gagtgcctcccttgcaactgcagcggccgctccgaggagtgcttctatgaccgggagctg
ttccggcgcaccgggcacgggggacactgcctcaactgccgcgacaacacggccgggccc
cactgtgagagctgcaggcagaattactaccgctgggagccgcagggaacctgccagccc
tgccactgccaccccgcaggttccctgcagccccagtgcgacaactcggggacctgtgtc
tgcaaagccaacgtgacgggctggaagtgcgagcgctgcaaggatggctaccacagcctc
agcgaaggtggctgcagaccctgcgcctgtgaccccgcgggcagcgtgggcacctgcgac
cccaccacggggcactgcacctgcaaggacagggtggaggggcacttgtgcaacaggtgc
cagccgggctggtttaacctgcaaccccacaaccccatcggctgcaccagctgcttctgt
tacggccattccagcgcctgcagggcggcagatggctacgaggagacctacatcctctcc
gacttcagccaagggctggagggctgggctgccacagctccaggcaccacagacctgcct
ctgcgctgggctggccgggagatcatcgccgagtgggatggagaggagtctgtggatttt
cttgcgccagagaagtttctgcagaaccagcgcctcagttatgggcagctcctgtccctg
ctgctgggagtggagaatgggacaagaacagaaagtggggtgcccctgctccaggtccag
ctgctgctggagggcgaggggatggagatcaccatgtccagcagcaagagccagctccag
catggaaagcaggctgtcaccttcaggctgcacgaggcagaggagggtgcggagcctttg
ctgtcggccttcagcttccagcgcctgctctccaacctgacctccctccgcctccgcgtg
ggcggccccgtgagaggcaggctgtccctgagcgaggtccagctcacatctgctcgccct
gggccaggcacacgggcaggttgggtggaggagtgcacgtgtcccatgggctacaccggg
cagttctgccagtcctgcgctcctggattcaagagggagatcccatttggcggccccttc
atcagctgcgtgccctgcacctgcaaccagcacggggactgccaccccctcacagggctc
tgccagtgcttgcacaacacagagggtcccttctgcgagcgctgcagccccggtttttat
ggcaaccccttcgctgggcgctctgatgactgcaagccctgcccctgccccggccgctcg
ccctgcaccgaggtgcccagcactggggaggtggtctgcacccactgccccccggggcag
agaggaaaacgctgtgagctctgtgatgacgggtttttcggggaccccctggggcagaga
ggtcccgtgcatccctgtgagccctgccagtgccacgggaacgtggatctcaatgccgtg
ggcaactgtgaccccgtgtcggggcgatgcctgcgctgcctgtacaacacaatgggtgac
cactgcgagaggtgtcggccgggcttctacggagatgcgctggctcccagccctgctggc
aagtgtgcaccttgtgattgcaaccccagtggctcagacccgaggatggagggttgtgat
cctggcacgggccagtgccactgcctcccacacgtgacaggcagagcctgtgggcagtgc
cagcccggctactacggcctggagcccactgtggggtgcaagagctgtgagtgccaccca
acagggtcacgggagagcgggtgccacgtgctgacggggcagtgctcctgccaacccggt
gtcacagggaagaaatgtgatcagtgccagcacggcttctttggcttctctgccaggggc
tgccgagcctgcaactgctccccgctgggctccgtcaccccgcagtgccacgagaacagc
acctgcctgtgccaccctggcttcgtgggctacaagtgtgaccgctgccaggccaacttc
ttccttgagccactgagctcccgctgccagcagtgtcctgcctgctacgggctggtgaag
gacgaggctgagcgcctcaaggccaggctgcaggagatggaggaatggctgcagaagcca
ggctgtgatacccgcccgggccagtctgccatgctgggagatgcaccccgtggagatggg
ctgcccagcccacatctcctgagaggtgcctgggccaccctcttggtacaggtggggcag
ctggcaggggcactgaacactgcacggggccgtctcaccaatgccagccgggccaccaga
tgctctgaccatggaccccccaagacctgcacgctgctctcggagatcggggccgtgctg
cagtcggcccagcaggagctcctgcatgctgcagacaccctggctgccacggaaattccc
caggaaatcccacagcagcccacaaactggagccactgggcactggaggctcaggctctg
tccaagagccacaaggagtccatggcacaggtggaggccgtggtcaggagagcactgcgt
gcctccaacgccagctccgagctcctgcaggacctgctggagggaaacgccacacgggac
gtgcagcatgagctggaggccgggtatgaggaaatccagcgggcgcaggaggagctgggt
gctggcatggcagaggtggcagtgggggccaggagagctgtgacagccgtggaacaggca
catgctgacctggctgagagacttttgcaggtggctgctctggggcagcaggtgctgcca
gtgcaggctgcagacctggcacaggagctggcagtgctggagcaggcagcagcagcccag
gagccgctggctcagcgggctgtggaggcatcccgcacactggcagctggattgcagctg
gagctgcaaaggactcacagcttcaagcagctgcgggaccaggctggctctgcccatgac
atggccaccatggctgtctccagaggaaaagctgtgctctccgatgccgagtccctcctg
gccagcttggaaggcatgaagaaggtgctggggcatcagaagagtcaggctgccctgagg
aggaggatggccgctgtgagggacagagtgatggtggatgctcagaggaagattaaacag
gcagagaagacactgggaaactcgctgtccatctccaccacagcccagaggacagctggg
gaggctgagcaaatctctgaggggagtgccaagagggcacgggctgtgctgcaggagagc
aaacaggccctcaaacatgccagccagctctccacacgtgccaatgagacccagtgggag
ctctcccggcaggagcacatggctgagaagctcagggcagacctggaggaagcacagcag
gtggggtcagaggtgagtgagatggcaaaaagtctccaggaagcccggggctcactcatg
tcagacatcgagaccctgaacaacctgctgaacagcttaggtaacctggagcaggacacg
gaggtggacgcagtgctgagcgcggggaggctgcagctggagcagctgtggctgcgcctg
gccacgccgggtgccctggccaggcagctcagccggctgcagcaggaggcagcacagcag
caggagaagatccaagcatttgagagcgacttggctgagatccgggctgacaagcagaac
ttggaggacattttgcggagcctccctgagagctgctccaagtga
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