Taeniopygia guttata (zebra finch): 100220753
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Entry
100220753 CDS
T01082
Symbol
SHOX2
Name
(RefSeq) short stature homeobox protein 2
KO
K09331
short stature homeobox protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100220753 (SHOX2)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100220753 (SHOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Motif
Other DBs
NCBI-GeneID:
100220753
NCBI-ProteinID:
XP_030136364
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Position
9:24231268..24237644
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AA seq
290 aa
AA seq
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MEELTAFVSKSFDPKAKEKKELITYREVLESGPLRGGGGPREPGGAAAEPGREDTGSPAA
RPAGRSPQREPDAAAERAAEAATPKLSDVSPELKERKEDAKAMEDEGQTKIKQRRSRTNF
TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVL
IGAATQFEACRVAPYVNVGALRMPFQQVQAQLQLDSAVAHAHHHLHPHLAHAPYMMFPAP
PFGLPLATLAESASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAALGL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggcgtttgtgtccaagtcgtttgatcccaaagccaaggagaagaag
gagctcatcacctaccgcgaggtgctggagagcgggcccctgcgcggcggcggcggcccg
cgggagcccggcggggcggcggcggaaccgggccgggaggacacgggcagccccgcggcg
cggccggccgggcgctccccgcagcgggaacccgacgccgccgccgagagagcggccgag
gcggccacccccaagctcagcgacgtgtccccagagctgaaggagcgcaaggaggatgcg
aaagcgatggaagacgaagggcagacgaaaatcaagcagaggaggagccggaccaatttc
accctggagcagctgaacgagctggaaaggcttttcgacgagacccactacccggacgcg
ttcatgcgggaggagctgagccagcggctggggctctccgaggccagggtgcaggtttgg
ttccagaaccggcgggccaagtgccgcaagcaggagaaccaactgcacaaaggggtcctg
atcggtgccgccacacagttcgaggcttgccgggtggctccttacgtgaacgtgggagcg
ctgaggatgcccttccaacaggttcaggcgcagttacagctggacagcgccgtggctcac
gctcaccatcacctgcaccctcacctggcccacgccccttacatgatgttccccgctccc
cccttcggcctcccgctggccaccctggccgagtccgcctccgccgcctccgtggtggcc
gccgccgccgccgccaagaccaccagcaagaattccagcatcgccgacctccgcctcaag
gccaagaaacacgccgcagctctggggctgtga
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