Taeniopygia guttata (zebra finch): 100229260
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Entry
100229260 CDS
T01082
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00310
Lysine degradation
tgu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100229260 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100229260 (PRDM16)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100229260 (PRDM16)
Enzymes [BR:
tgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
100229260 (PRDM16)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100229260 (PRDM16)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100229260 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
Motif
Other DBs
NCBI-GeneID:
100229260
NCBI-ProteinID:
XP_030145034
LinkDB
All DBs
Position
21:2659883..2946743
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AA seq
1266 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMAVQRST
LKETNFGWEQILTDPEVTSQEGNIKKIPDALGTEKFCGDAGQGGAGNWLKFIRVSCSCAE
QNLAVCHVNEQVYYKVIKEIEPGEELLVCLKEGGYSLGNMAPSMEEEPSFRCEDCDELFQ
SKLDLRRHKKYGCGAVGALYDSLSDNIKQEGLGDGQVYECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYSPTGIFAPGLPLTPSSMMDKSKPSPNLNHASL
GFNEYFPSRPHPGGLPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTP
DAKLPSPLGNPALPLISAVSNSNQAPSGEEKCESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLDSDAESDRDKTKDKSKQMETKPDFVSSSVSASSTNTTSEIPL
FYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERALNHNLLVKAEPKSPRDLHKVGGTSSESPFDLTTKPKEMKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL
ESFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR
HLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
KHEHENVPVSQHSGVITNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQA
SALADKRPEIQDIDGNSQCHGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETASPTAEP
RGAFEDEEDEEPTSLTMSFEHSRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKD
VFNSTLDSEAIKQTLYRQAKNQAYAMMLSLSENAPLHTSSQNSLGAWLDMAGAASESGTF
NPINHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactgcccaaaagtgacagcgagattgtaaataat
atgtacgagaccgaccccgatctccttgctggagaaagcgcagaggaggaaactgaggac
agtataatgtcccccatccctgtgggacctccgtcacccttccccaccagtgaggacttc
actcccaaggagggctcaccctatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgatcccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatggcagtacagaggagcaca
ttaaaggaaacaaactttggatgggagcaaatactgactgatcctgaggtgacctcccag
gagggcaatataaaaaagattcccgatgccctgggcactgagaagttctgtggggacgcc
ggccagggcggggctgggaactggctgaagttcatccgagtgtcctgctcctgcgccgag
cagaacctggctgtgtgccacgtcaacgagcaggtctattataaagttattaaggagatt
gagccgggggaagagctcctggtgtgtctgaaggaaggaggttattccctcgggaacatg
gcacccagcatggaagaggagccctcgttccgctgcgaggactgcgatgagctcttccag
tccaagctggacctgcggcgccacaagaagtacggctgcggtgccgtgggggccctgtac
gacagcctcagcgacaacatcaagcaggaagggctcggagatggacaggtctacgagtgc
aaggactgtgagaggatgttccccaacaaatacagcctggagcagcacatggtgatccac
accgaggagagggagtacaagtgtgaccagtgtcccaaggctttcaactggaaatccaac
ctgattcgtcaccaaatgtctcacgacagtgggaaacggtttgaatgtgaaaactgtgtt
aaggtgtttacggaccccagcaacctccagcggcacatccgctcgcagcacgtgggggca
cgggcccacgcctgccccgactgcggcaagaccttcgccacctcctcgggcctcaagcag
cacaagcacatccacagcactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acgcagttctccaacctgtgccgccacaagcggatgcacgcggactgccgcacccagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctccctcaacaagcaccggcgc
ttctgcgagggcaagaaccattacagccccaccggcatcttcgcccccggcctccccctc
acgcccagctccatgatggacaaatccaagccctctcccaacctcaaccacgccagcctg
ggttttaacgagtatttcccatcccgcccgcaccctggtggactcccgttctcgccagcc
cccccagccttccccgccctcaccccgggattcccggggatttttccgccttctctgtac
cccaggccccccttgttaccacccacgcaactgctcaaaagtcccctcaaccacactccg
gacgcgaagctccccagccccctcgggaacccagcgttgcccctgatctccgcagtgagc
aacagcaaccaggctccttcaggggaggagaaatgtgaaagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtccgatggcagtgactttgaggatgtc
aatacaaccacgggcacggatctggacaccacgactggcaccggctctgacctggacagt
gacgcggagagtgacagggacaaaacgaaagacaagagcaaacaaatggagaccaagcca
gattttgtcagcagctcggtgtctgccagttccaccaacaccacgagtgagatccctctc
ttctattctcagcattccttctttcctccccccgaggagcacctgctgcccaccacgggc
gctgccaatgactctattaaagctatcgcctccatcgcagagaagtattttgggcctggc
tttatggggatgcaggagaaaaagatgggttcgctcccgtatcattccatgttccctttc
cagttcctccccaatttcccccactccctctaccctttcacggagcgggccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtcggtggcacc
agctcggagtcccccttcgatctcaccacgaagccaaaagagatgaagccaatcctgccg
ccccccaaggtcctcccagccccgtcctcaggggaggagcagccactggatctgagcatt
ggcaaccgcatccgagccagccagaacggagggagagagccacggaaaaaccacatttat
ggggagaggaagctgatggcaagtgaggtcttacctaagatttcccagtcccagctgcct
cagcagccttccctgcactacgctaagccatcgccctttttcatggaccccatctacagc
agggtggagaagcggaaggtgacagaccccgtgggtgccctcaaggagaagtacctgcga
ccctccccgctgctttttcacccccagatgtcggccatcgagacgatgacggagaaactg
gagagctttgcagccatgaaggccgactctggctcgtccctgcagccccttccccaccac
cccttcaacttccgatcgccgccgcccacgctctccgaccccatcctgcgcaagggcaag
gagcgctacacctgcaggtactgtggcaagatcttcccacgctcagccaacctgacgagg
catctgcggacgcacactggggagcagccttacaggtgtaaatactgtgacaggtcattc
agcatttcctccaacctgcagcggcacgtcaggaacatccacaacaaggagaagccattc
aagtgccacctgtgcaacaggtgcttcgggcagcagaccaacctcgacaggcacctcaag
aagcacgagcacgagaacgttccagtgagccagcactccggagtcatcaccaaccacctc
gggaccagcgcctcctcccccacctcggaatcagacaaccatgcacttttagacgaaaaa
gaggattcctatttctcagaaatcagaaattttattgccaatagcgagatgaatcaagcg
tcggctttagcagataaaaggccagaaatccaggatattgatggcaattcccagtgccac
ggactggcaaacgagaagacagaagatgtggacgacgaggacgaagaactggaagaggaa
gacgatgacagcctgactgggaagtcgcaggacgagacggcgtcgcccacggcggagccc
cggggagcgttcgaggacgaggaggatgaggagcccacgtctctcaccatgagctttgag
cacagccgaaggtgtattgaggaggacgaagccggcctgttagatttggagcagatgccg
aattttgggaaggggctggatctccgcaaagcagccgaggaagcatttgaagttaaagat
gtgtttaattccaccttagactctgaggcaataaaacagactctgtacaggcaggctaaa
aaccaggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacacgtcctcc
cagaactctctgggggcttggctggacatggcaggagcagcttcagagtcggggaccttt
aaccccatcaaccacctctga
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integrated database retrieval system
