Taeniopygia guttata (zebra finch): 100231295
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Entry
100231295 CDS
T01082
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100231295 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tgu01007
]
100231295 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100231295 (GARS1)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100231295 (GARS1)
Enzymes [BR:
tgu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
100231295 (GARS1)
Amino acid related enzymes [BR:
tgu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100231295 (GARS1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100231295 (GARS1)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100231295 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
100231295
NCBI-ProteinID:
XP_032602477
Ensembl:
ENSTGUG00000000364
LinkDB
All DBs
Position
2:complement(3906892..3932497)
Genome browser
AA seq
711 aa
AA seq
DB search
MPLPRSVLPALLRRLARPLRSAAPPAMDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQ
VDIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLY
DFGPVGCALKNNIIQAWRHHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKN
GECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELADLFVNYNVKSPVT
GNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGN
SFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAH
VMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAE
SKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAY
KKDAKVVMEYLSMCDECYINEMEQLLNDKGEFTVETEGKTFLITKDMVTVKRFQKTLHVE
EIIPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFM
PFVKELSEALTRTGISHKVDDAAGSIGRRYARTDEIGVAFGITIDFDTVNRTPHTATLRD
RDSMRQIRAEISELPGIIRDLANGFLTWADVEAKYPQFEGQETGKKDTIEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccccgtagcgtcctgcccgccctgctgcgccgcctcgcccgcccgctccgc
tccgccgccccccccgccatggacggcccgcaggccgaggcgctgctggcgccgctccgg
aacgcggtgcggcagcagggagagctggtgaggaagctgaaggaagagaaagctccccag
gtggacatagacagagctgtagcagagctcaaagctcggaagagggtcctagaagcaaag
gagctggccttacagcccaaagatgacatcgtggacagagttaagatggaagacacactc
aaaaggaggtttttctatgaccaagctttttctatttatggaggagtcagtggtctgtat
gactttgggcctgttgggtgtgctttgaagaacaacatcatccaagcatggagacatcac
tttattcaggaagagcaaatcctggagattgactgcaccatgctcacgcctgagccggtt
ctaaagacttctggtcatgtagacaagtttgctgacttcatggtgaaagatgtgaaaaac
ggggaatgtttccgtgccgatcatctcttaaaagctcacctgcagaaactgatgtctgac
aagaagtgcacggcagagaaaaaggcagaaatggaaaatgttctaacacagttggacaat
tacggccagcaagagcttgcagatctttttgtgaactacaatgtgaagtcccctgtcact
gggaatgacctgtcccctcctgtttctttcaatctgatgttcaagacctccattgggcct
ggaggaaatatgcctggctatctgaggccagaaactgcacagggaatattcctcaacttc
aaacgtctgctggagtttaaccaaggcaaattgccttttgctgctgcccagattggaaat
tccttcaggaatgaaatctcaccccgctccggccttatcagagtgagggaattcaccatg
gcagaaattgagcactttgtggaccccagtgagaaaaaccaccccaagtttcagaacgtg
gcagatctcaacatcctcctgtactcggccaaggcccaggtcagcgggcagtctgcgcac
gtcatgcggctgggagacgccgtccagcagggtgtgatcaataactctgttctcggttac
ttcatcggcagaatctacctcttcctcacgaaggtcggcgtatccccggagaagctgcgc
ttccgacagcacatggagaatgagatggctcattatgcctgtgactgctgggatgcagag
tccaaaacctcctatggttggattgagatcgttggctgtgctgatcgttcctgctatgac
ctttcctgccatgcccgtgccaccaaagttcctctcatagctgagaagcatctcaaagaa
cctagaacagtcaacattgttcagtttgaggcaaataagggagccattggcaaagcttac
aagaaggatgccaaggtggtgatggaatacctttccatgtgtgatgagtgctacatcaac
gagatggagcagctgctcaacgacaaaggggaattcactgttgaaactgaagggaaaact
tttctaataacaaaggacatggttactgtgaagagatttcagaaaacattacatgtggaa
gaaatcatcccaaatgtcattgagccctcgtttggcattggcaggatcatgtacacagtg
tttgagcacacattccgcatccgggaaggagacgagcagagaacgtacttcagcttccca
gctgttgtagcaccattcaaatgctctgttcttcctctgagccagaatcaggaattcatg
ccttttgtcaaggaattatccgaagcactgaccaggaccgggatctcccacaaggtggat
gatgcagcgggctccatcggccggcgctacgcccgcaccgacgagatcggcgtggccttc
ggcatcaccatcgacttcgacaccgtgaaccgcaccccacacacggccacgctgcgcgac
cgcgactccatgcgccagatccgcgccgagatctctgaacttcctggcatcatccgagac
ctggccaacggttttctcacctgggctgatgttgaggcaaagtatccacaatttgaggga
caagagactggcaaaaaggacacaatagaggaataa
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