Taeniopygia guttata (zebra finch): 100231901
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Entry
100231901 CDS
T01082
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100231901 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231901 (MBD4)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100231901 (MBD4)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
100231901 (MBD4)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100231901 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
100231901
NCBI-ProteinID:
XP_030139192
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All DBs
Position
12:372305..375947
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AA seq
567 aa
AA seq
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WRRRERRAGERGAGPAGPGARVPNTGLEHGSRQRLRAARPGPGSCGGPCPAVRGAPPAAG
LTALFFPRSPGGGGAAAEGPGPSPSPGPRAVPRGWQRVSSRRRAGRTAGRTDVYFISPEG
KKLRSKRALVEYLQKTGETTLKAADFDFAAPRGSTRPGLRECGTGAARTDLEKEDCQSKV
QELHAQNGAEVGIQNIQAGNGHLEDAISTVEGTDLAVVGTNPEESLKTKRKRTDGKTVQT
RKCKKGSERRNQGDPKSKRQRRISNTRETECAQNKRVCRQTDARGADSQGVGALGADPAG
AGRALSAVPRARLRSAAGSHRELGCLPEQGPCSGGTPAARPEEGSSTLETGKVPGPGDLG
EQRAKPEPELDAEPWDRTSSAAATISPEESVPRTQVERRKTSPYFSSKYSKEALSPPRRK
ALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARA
ADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEW
KEVQPQDHKLNVYHTWLWENRERLSID
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
tggcggcgccgggagcggcgggcgggtgagcgcggggcgggcccggctggaccgggagca
cgggtcccgaatacgggcctcgagcacgggtcccgtcagcggctgcgcgcggcacggccc
gggcccggctcgtgtggcggtccgtgccccgccgtgcgcggagctccgccggcagcagga
cttaccgcgctcttcttcccccgcagccccggcggcggcggcgcggcggcggaagggccc
ggccccagccccagccccggccccagggccgtgccccgcggctggcagcgggtgagcagc
cgccggcgggcgggccggacggccggcaggaccgacgtgtacttcatcagccctgaaggg
aagaagctgaggtcaaaacgagcacttgtggagtatttacagaaaactggggagacaaca
ctgaaagcagcagattttgattttgcagctcctcgagggagtacacgcccaggattgagg
gaatgtggcactggagctgcgaggactgacctggaaaaggaggactgtcagagcaaagtg
caggagctccatgcacagaatggtgctgaggttggaattcagaacatccaggctgggaat
ggacacctggaagatgctatatctactgtggaaggcacagatttagccgtggtaggcaca
aacccagaggagagtttgaaaaccaaaagaaaaaggacagatgggaaaactgtccaaacg
aggaaatgtaagaagggctcagaaaggaggaaccaaggtgaccccaagagcaagaggcag
agaagaatctctaacacacgggagaccgagtgtgctcagaacaagagggtctgcaggcag
acagacgcccgtggtgctgacagccagggagtgggggcgctgggtgctgaccctgcgggt
gcagggagagctctgtcagcagtgcccagggcacggctacgctcggcggctggctcacac
agggagctgggttgcctgccagagcaggggccatgctccggtggcacacctgctgcgagg
cctgaggagggatcctctactctggagacggggaaggtgccgggtccaggggatctgggt
gagcagcgtgctaaacctgagcccgagctggatgctgagccgtgggacaggacgagctcc
gccgcagccacaatatcaccagaagagtctgtcccacgaacacaagtggagagaaggaaa
acgagtccgtatttttccagtaaatacagcaaagaagccctcagcccacccaggaggaag
gccctcagaaaatggactcctccacgttctcctttcaatcttatccaggaaacactcttc
catgatccatggaagcttctcattgccaccatatttctcaacaaaacttcagggaaaatg
gccattccagtgctctgggagttcctgaagaagtatccttctcctgaggtagccagggct
gcagactggaaagaaatgtcagagctgctcaaacctcttggcctctatgaactcagagcc
aaaaccatcatcaggttctcaggtgagtacctgagcaaggcgtggcgctacccgatcgag
ctgcacggcatcggcaagtacggcaacgactcctacaggatcttctgtgttaacgaatgg
aaggaggtgcagccacaggaccacaagttgaacgtgtaccacacgtggctgtgggagaac
cgggagaggctgagcatcgactga
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