KEGG   Taeniopygia guttata (zebra finch): 100232198
Entry
100232198         CDS       T01082                                 
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03430  Mismatch repair
tgu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100232198 (MLH1)
   03460 Fanconi anemia pathway
    100232198 (MLH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100232198 (MLH1)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     100232198 (MLH1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 100232198
NCBI-ProteinID: XP_030121063
Ensembl: ENSTGUG00000005654
LinkDB
Position
2:complement(47658953..47676767)
AA seq 749 aa
MAGAIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSA
ANSSVVTKGNSDKVYAHQMVRTDSREQKMDAFLQPVNNSLSSGPTEVTTGVNARPPEGAD
RPQDAEMEEVSDLVEMADVQENPVKPGGPSESGCLSPETVLSRKRPREDMDVELEKDDTR
KDMTAACTPRRRIINLTSVLTLQEEINNQAHAKLQEMLHEHSFVGCVSPQWALAQYQTKL
YLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEEL
AEYIVEFLKKKTEMLKDYFSLEIDEEGNLSGLPLLIDNYVPPLEGLPMFILRLATEVNWD
EEKECFESLSKELAMFYSIRKQYIIEESNPTNSQNEESESGSTTWKWTVEHVLYKAFRTY
LLPPKHFAEDGNILQLANLPDLYKVFERC
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggccggcgccatccggcggctggatgaggccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatagagaactgtttggatgctaaa
tctacgagtatccaggtagtagttaaagaaggtggtctgaagttcatccaggttcaggat
aacggctgtggtatcagaaaagaagatctcgacattgtatgtgagagattcactacaagt
aaactgcaaaaatttgaagacttggctagtatttctacatatggttttaggggcgaggcc
ttggctagcatcagtcatgttgcccacgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaagcccctccaaagccctgtgct
ggaaaccaaggaactcagatcacagttgaagatcttttttacaatgtaaatacaaggagg
aaggctttaaagaacccaaatgaagaatatgcaaaaatactagaagttgttagcaggtat
gccatccataactcaggcatcagcttttcagttaaaaagcaaggtgacactgtgtcggat
gttagaactttatccaatgcctcaacagtggacaacatcagggccatctttggaaatgct
gttagcagggaactcatagaagtgggctgcgaagatgcaaatctggcctttaaaatgaaa
ggttacatcactaatgcaaactactctgtgaagaaatgtatatttttactcttcataaac
catcggttggtagagtcagccgctctgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacttaagcttggaaatagccccccagaatgta
gatgtgaatgtgcatcctacaaaacatgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacaacatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggagctgactgctcttccaatgaggtagtaaaatcagca
gcaaactcttctgtggttaccaagggaaacagtgacaaagtttatgcgcatcagatggtc
cgcactgattcccgagagcagaaaatggatgcttttcttcagccagtgaacaactcccta
agttcaggccccactgaagtgacaacaggggttaatgcaagacctccagagggtgcagac
agaccccaggatgctgaaatggaagaagtcagtgacttggttgaaatggctgatgttcag
gagaatccagtgaagcctggggggccaagcgagagtggatgcttgtctcctgagactgtg
ctttctcggaagagaccacgggaagacatggatgtagaactggagaaagatgacaccaga
aaggacatgactgctgcctgcacccctagaagaagaattatcaacttgactagtgtgttg
actctccaggaagaaattaataaccaggcacatgcaaaactccaggagatgctacatgag
cactcatttgttggttgcgtcagtcctcagtgggctctggcccagtaccagacaaaactg
taccttctcaatacaacaaaactcagccaagaactcttctaccagatacttatttatgac
tttgcaaactttggagtcttaaggttgtctgagccagctcctttatatgagctttcaatg
cttgctttagaggaccctgaaagtggctggacggaagaagatggcccaaaagaagagctt
gctgagtacattgtggagtttttgaaaaagaagactgaaatgttgaaagattatttctct
cttgaaattgatgaggaaggaaatcttagtgggttaccacttctgatagacaactatgtc
ccaccattggaaggactgcctatgtttatcctgcgcttggccacagaggtaaactgggat
gaagaaaaggagtgttttgaaagcctgagtaaagaactagccatgttctactccatcaga
aagcagtatataatagaggaatccaacccaacaaactctcagaatgaagaatctgagtct
ggttcaacaacatggaaatggactgtggaacatgtgctttacaaagcttttaggacttat
cttttacctcctaaacactttgcagaagatggcaacattttgcagcttgctaacctgcct
gacttgtataaagtttttgaaagatgttga

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