Taeniopygia guttata (zebra finch): 100232198
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Entry
100232198 CDS
T01082
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03430
Mismatch repair
tgu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100232198 (MLH1)
03460 Fanconi anemia pathway
100232198 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100232198 (MLH1)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100232198 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100232198
NCBI-ProteinID:
XP_030121063
Ensembl:
ENSTGUG00000005654
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All DBs
Position
2:complement(47658953..47676767)
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AA seq
749 aa
AA seq
DB search
MAGAIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSA
ANSSVVTKGNSDKVYAHQMVRTDSREQKMDAFLQPVNNSLSSGPTEVTTGVNARPPEGAD
RPQDAEMEEVSDLVEMADVQENPVKPGGPSESGCLSPETVLSRKRPREDMDVELEKDDTR
KDMTAACTPRRRIINLTSVLTLQEEINNQAHAKLQEMLHEHSFVGCVSPQWALAQYQTKL
YLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEEL
AEYIVEFLKKKTEMLKDYFSLEIDEEGNLSGLPLLIDNYVPPLEGLPMFILRLATEVNWD
EEKECFESLSKELAMFYSIRKQYIIEESNPTNSQNEESESGSTTWKWTVEHVLYKAFRTY
LLPPKHFAEDGNILQLANLPDLYKVFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccatccggcggctggatgaggccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatagagaactgtttggatgctaaa
tctacgagtatccaggtagtagttaaagaaggtggtctgaagttcatccaggttcaggat
aacggctgtggtatcagaaaagaagatctcgacattgtatgtgagagattcactacaagt
aaactgcaaaaatttgaagacttggctagtatttctacatatggttttaggggcgaggcc
ttggctagcatcagtcatgttgcccacgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaagcccctccaaagccctgtgct
ggaaaccaaggaactcagatcacagttgaagatcttttttacaatgtaaatacaaggagg
aaggctttaaagaacccaaatgaagaatatgcaaaaatactagaagttgttagcaggtat
gccatccataactcaggcatcagcttttcagttaaaaagcaaggtgacactgtgtcggat
gttagaactttatccaatgcctcaacagtggacaacatcagggccatctttggaaatgct
gttagcagggaactcatagaagtgggctgcgaagatgcaaatctggcctttaaaatgaaa
ggttacatcactaatgcaaactactctgtgaagaaatgtatatttttactcttcataaac
catcggttggtagagtcagccgctctgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacttaagcttggaaatagccccccagaatgta
gatgtgaatgtgcatcctacaaaacatgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacaacatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggagctgactgctcttccaatgaggtagtaaaatcagca
gcaaactcttctgtggttaccaagggaaacagtgacaaagtttatgcgcatcagatggtc
cgcactgattcccgagagcagaaaatggatgcttttcttcagccagtgaacaactcccta
agttcaggccccactgaagtgacaacaggggttaatgcaagacctccagagggtgcagac
agaccccaggatgctgaaatggaagaagtcagtgacttggttgaaatggctgatgttcag
gagaatccagtgaagcctggggggccaagcgagagtggatgcttgtctcctgagactgtg
ctttctcggaagagaccacgggaagacatggatgtagaactggagaaagatgacaccaga
aaggacatgactgctgcctgcacccctagaagaagaattatcaacttgactagtgtgttg
actctccaggaagaaattaataaccaggcacatgcaaaactccaggagatgctacatgag
cactcatttgttggttgcgtcagtcctcagtgggctctggcccagtaccagacaaaactg
taccttctcaatacaacaaaactcagccaagaactcttctaccagatacttatttatgac
tttgcaaactttggagtcttaaggttgtctgagccagctcctttatatgagctttcaatg
cttgctttagaggaccctgaaagtggctggacggaagaagatggcccaaaagaagagctt
gctgagtacattgtggagtttttgaaaaagaagactgaaatgttgaaagattatttctct
cttgaaattgatgaggaaggaaatcttagtgggttaccacttctgatagacaactatgtc
ccaccattggaaggactgcctatgtttatcctgcgcttggccacagaggtaaactgggat
gaagaaaaggagtgttttgaaagcctgagtaaagaactagccatgttctactccatcaga
aagcagtatataatagaggaatccaacccaacaaactctcagaatgaagaatctgagtct
ggttcaacaacatggaaatggactgtggaacatgtgctttacaaagcttttaggacttat
cttttacctcctaaacactttgcagaagatggcaacattttgcagcttgctaacctgcct
gacttgtataaagtttttgaaagatgttga
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