Taeniopygia guttata (zebra finch): 115491712
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Entry
115491712 CDS
T01082
Name
(RefSeq) transcription intermediary factor 1-beta-like
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tgu01001
]
115491712
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
115491712
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115491712
Protein kinases [BR:
tgu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115491712
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115491712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Collagen
Motif
Other DBs
NCBI-GeneID:
115491712
NCBI-ProteinID:
XP_032601889
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MFPHVSTPCFPPPPPPFFSPPFPPVFPFFPAVCSSQPLDEAIRQQRSVLVALLQRLADKH
AAVQRCAKELRAFMRGLSEAQQRLQVEVKLAVLQVMRELNKRSKALVCDVQRAAEGRQER
LQRQQRALSRAQRQQEHVLRFGARALDSPHGAALLLSRRLIHSQLLRALGVPLEPLEPQG
EMRFQWDPQGWTRSAQSFGAIISEPPLPPSLSPPPAGRPSPTAQGPPTLSPPPQLSPPCL
EPAATESPETAPSPGNGVTGGRTRNPGSSPREEKFVKTLLIKRRGPPGAQESPRLPKEPR
VSLERLELDLELDPAQPPVFRIFPGPSEQEFSLIVIEQGTAGTEGTEGTEGTEGTPGTAG
TAGTVQPHRVLLVKEEQQESPIGDIGDIGDIKPVGLLPPPPGDPGPVLGSPPVPGVPGVP
GVPGVPGVSCCRVCGQAGAVVMCDRCQRCFHLHCHLPALQDVPSPIRRPEWTCLLCQELP
PPLPEPPLQTEPGPPLKLSPQDQQRCEFVLLELLCHEPCRPLQRLCSSPDGRDAMDLTLM
RARLQEKLSPPYRSPEEFARDGWRLLRQFHRLTEDKADVQSILGLQRFLESRLSAAFGDQ
KFSRLLLDPEEALEVPPGS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtttccccatgtttccaccccatgttttcccccacctcctcccccatttttttccccc
ccatttccccccgttttcccgttttttcccgccgtgtgcagctcgcagccgctggacgag
gccatccggcagcagcgctcggtgctggtggcgctgctgcagcgcctggcggacaaacat
gcggcggtgcagcgctgcgccaaggagctgcgcgccttcatgcgcggtctgtcggaggcg
cagcagcggctgcaggtggaggtgaagctggccgtgctgcaggtcatgcgggagctcaac
aagcgcagcaaggcgctggtgtgcgacgtgcagcgcgcggccgaggggcggcaggagcgg
ctgcagcggcagcagcgcgcactgagccgggcgcagcggcagcaggagcacgtgctgcgc
ttcggcgcccgcgccctcgacagcccccacggcgctgcactgctgctgtcccggaggctg
atccactcgcagctgctccgcgctctgggggtgccgctggagccgctggagccgcagggg
gagatgagattccagtgggacccgcagggctggaccaggagcgcccagagcttcggtgcc
atcatttcggagccgcccctccccccctcgctgagccctccccccgccggccgcccctcc
cccaccgcgcagggtccccccacgctgtcacctcccccccagctgtcacctccctgcctg
gagccagcggccaccgagagccccgagacggcccccagccctggaaacggcgtcaccgga
gggaggacgaggaaccctggcagttccccccgggaggagaagttcgttaagacgctgctc
attaagcggaggggtccccccggggcccaggagagcccccggctccccaaggagccgcgg
gtgagtttggagcgcctggagctggacctggagctggacccggcgcagccgcccgtgttc
cgcatcttcccggggccctcggagcaggagttcagcctcatcgtcatcgagcaggggaca
gcggggacagaggggacagaggggacagaggggacagagggcacaccggggacagcgggg
acagcggggacggtgcagccacacagagtcctccttgtcaaggaggagcagcaggagtcg
cccatcggggacattggggacattggggacatcaaacccgtggggctgctgccgcctccc
ccgggggatccgggccctgtcctgggctccccccccgtcccgggggtcccgggggtcccg
ggggtcccgggggtcccgggggtgtcgtgctgccgcgtgtgcggccaggccggggccgtg
gtgatgtgtgaccgctgccagcgctgcttccacctgcactgccacctgcccgcgctgcag
gacgtgcccagtccgatccgccgccccgagtggacgtgtttgctgtgccaggagctgccc
ccgcccctgccggagccgccgctgcagacggagccgggcccccccctcaagctgagcccc
caggaccagcagcgctgcgagttcgtcctgctggagctgctgtgccacgagccctgccgg
cccctgcagcgcctctgcagctccccggacggccgcgacgccatggacctgacgctgatg
cgggcgcggctgcaggagaagctgagccccccctaccgcagccccgaggagttcgcccgc
gacggctggcgcctgctgcgccagttccaccgcctcaccgaggacaaggcggacgtccag
tccatcctggggctgcagcgcttcctggagagccgcctcagcgccgccttcggggaccag
aagttctcccggctcctgctggaccccgaggaagctctggaggtgcctccaggctcctga
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integrated database retrieval system
