Taeniopygia guttata (zebra finch): 115497713
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Entry
115497713 CDS
T01082
Symbol
DHX33
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX33
KO
K17820
ATP-dependent RNA helicase DHX33 [EC:
5.6.2.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115497713 (DHX33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
115497713 (DHX33)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115497713 (DHX33)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Other ribosome biogenesis factors
115497713 (DHX33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_assoc_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
115497713
NCBI-ProteinID:
XP_030143685
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All DBs
Position
19:complement(6836524..6847890)
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AA seq
717 aa
AA seq
DB search
MAAAVTGLQLPACSAPHRVIASSLRQGARGARESPGGPGRTGPVGEREMAQDSEAPPAKR
LKAAPPGTPPQSAPPPAHVQRRSLPISAARGPLLARLRRLDTAVLIGETGSGKTTQLPQY
LYEVGIGHPGTIAVTQPRRVAAVTLAARVAEEKRTELGRLVGYTVRFDDCSCAETRIRFL
TDGMLLREAIGDPLLHKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKERGLRPLKVIVM
SATMDVDLFSQYFNGAPVIYLEGRQHPIDIFYTKEQQSDYLQAALVSIFQIHQEAPACQD
ILVFLTGQEEIEAMTKTCRDVAQHLPEGCPRMTVLPLYASLPHSQQLRAFKPTPEGCRKV
ILSTNIAETSITIAGIKFVVDTGMVKAKKYSPETGLEVLAVQQVSKAQAWQRTGRAGRQE
SGICYRLYTEEDFEKFEEMTTPEIQRCNLASVVLQLLALKIPNVLTFDFMSKPSPDAIQA
AIDQLDLLGAVTQKEGQVVLTSLGKKMAVFPLDPKFSKAILLSPKFHCAEEILTIVSLLS
VDSVLHNPPAQRDEVQAARRKFISSEGDHLTLLNVYRAYKNVNGHKGWCRENFINGRNMK
LMAEVRAQLRDICIKLSLPLESCRGDTGSVRRCLAHGLFMHAAELRPDGSYGTVDSQQAV
AIHPSSVLFQARPACVVFTGLLRTSRCYMRDLCVVDAEWLHEAAPEYFRRKLRTANN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtgacgggactacaactcccagcatgctccgcgccgcatcgcgtgatt
gcgtcatcgctgcgtcagggagcccgcggagcgcgggagagccccggcggaccgggccgg
accgggcccgtgggggagcgggagatggctcaggacagcgaggcgcctccggccaagcgg
ctcaaggccgcaccccccggcacgccgccccagagcgccccgccgcccgcacacgtgcag
cgccgctccctgcccatctccgcagcccgcgggccgctgctggcccggctccgccgcctc
gacaccgccgtcctcatcggagaaacgggctcagggaagaccactcagctccctcagtac
ctgtacgaagtggggattggccaccccggcaccattgccgtgacccagccccgcagggtg
gcggctgtcaccctggctgcccgagtggctgaggagaagaggacggagctggggaggctg
gtgggctacacggtgcgcttcgatgactgctcgtgcgccgagaccaggatccggttcctg
acggacgggatgctgctgcgggaggccatcggggaccctctgctgcacaagtacagcgtg
gtcatcctggacgaggcccacgagaggaccatccacacggacgtgctcttcggggtggtc
aaagccgctcagaagaagcgaaaggagcggggcctgcggccactgaaagtgattgtcatg
tcagccacgatggatgtggacctgttctcccagtacttcaatggagctcctgtcatctat
ctggagggccggcagcatcccattgacatcttctacaccaaggagcagcagagtgactac
ctgcaggcagcactggtatccatcttccaaatccaccaggaagcccctgcatgccaggac
atcctggtgttcctgactggtcaggaagaaattgaagcaatgaccaaaacctgtcgagac
gttgcccagcacctccccgagggctgcccacggatgacagtgctgcccctttatgcttct
ctgccccactcccaacaactccgtgccttcaaacctacccctgagggctgtcgcaaagtg
atcctctccaccaacatcgcagaaacctccatcaccattgcgggcataaaatttgttgtg
gacacaggcatggtcaaagccaagaagtacagccctgaaactggcctggaagtgctggca
gtgcagcaggtgtccaaggcccaggcctggcagcgcacgggcagagcagggaggcaggag
agcgggatctgctaccggctctacactgaggaggactttgagaagtttgaggaaatgaca
acacctgagatacagaggtgtaacctggccagtgtggtgcttcagctcctggccctgaaa
attcccaatgtgctcacctttgacttcatgtccaaaccatctcctgatgctattcaagca
gcaattgatcagctggacctgctgggggctgtgacccaaaaggaaggtcaggttgtcctg
acctccttgggaaagaaaatggcagtctttccactggatccaaagttctccaaggccatc
ctcctgtcacccaagttccactgtgcagaggagatcctgaccatcgtgtcactgttatca
gtggacagtgtcctccacaacccccctgcccagcgggatgaggtgcaggctgccaggagg
aaattcatctccagtgagggggatcacctgaccctgctcaacgtgtacagggcctacaag
aacgttaatgggcacaagggatggtgcagagagaactttatcaatggcaggaacatgaag
ctgatggcagaagtcagagctcagctcagggacatttgtataaagctgtcgctgcccctg
gagtcgtgccgcggcgacacgggcagcgtgcggcgctgcctggcccacgggctgttcatg
cacgcggccgagctgcggcccgacggctcctacggcacggtggactcgcagcaggcggtg
gccatccacccctcctcggtgctgttccaggccaggccggcctgcgtggtgttcaccggg
ctgctgcgcaccagccggtgctacatgcgcgacctgtgcgtggtggatgccgagtggctg
cacgaggccgcgcccgaatacttccgcaggaagctccgcacggccaacaactga
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