Thermococcus sp. AM4: TAM4_318
Help
Entry
TAM4_318 CDS
T01638
Name
(GenBank) Geranylgeranyl pyrophosphate synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tha
Thermococcus sp. AM4
Pathway
tha00900
Terpenoid backbone biosynthesis
tha01100
Metabolic pathways
tha01110
Biosynthesis of secondary metabolites
Module
tha_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TAM4_318
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tha01006
]
TAM4_318
Enzymes [BR:
tha01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TAM4_318
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TAM4_318
2.5.1.29 geranylgeranyl diphosphate synthase
TAM4_318
Prenyltransferases [BR:
tha01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TAM4_318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5821
Motif
Other DBs
NCBI-ProteinID:
EEB74030
UniProt:
B7R2W5
LinkDB
All DBs
Position
complement(1239847..1240878)
Genome browser
AA seq
343 aa
AA seq
DB search
MTDYKELFTRIKNLAKDVDKIILELVPEKDPKKLYEAARHYPLAGGKRVRPFVVLRAAEA
VGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDELRRGRPTVHKVWGVNMAILAGDLLFSK
AFEAIAKAEVSPEKKARILEVLVKTSNELCEGQALDIEFETKDEVTVDEYLKMISGKTGA
LFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRK
GKKTLIVSHFFQHASEEDKAEFLKVFGKYAGDAKGDALIHDEKVKEEVAKAIELLKKYGS
IDYAANYAKNLVKEANEALKILPESEARKDLELLAEFLVEREF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacggactacaaggaactcttcacgcggatcaaaaacctcgcgaaggacgtcgataaa
attatcctcgaactcgttcccgaaaaggacccgaagaaattatacgaggccgcccgccac
tacccgctcgccggcggcaaaagggttcgccccttcgtcgttctcagggcagcggaggcc
gttggcggcgaccccgagaaggctctctatccagcggccgctgtggagttcattcacaac
tattcgctggttcacgacgacataatggacatggacgagctgaggcgcggaaggccgacc
gtccacaaggtctggggcgtcaacatggccattttagctggcgatttgctgttttcaaag
gcctttgaggcgatagccaaggctgaggtaagccccgagaagaaggcgagaatcctcgag
gttctcgtgaagacctcaaacgagctctgcgagggtcaggcactcgacatagagttcgag
acgaaggacgaggttaccgttgacgagtacctcaagatgatcagcggcaagaccggggcg
ctcttcgacggctcggcgacgataggcgcaatcgtcggcaccgacaatgaggagtacata
agggccctctcgaagtggggaaggaacgtgggaatagccttccagatatgggatgacgtt
ctcgatttgattgccgacgaggagaagctcgggaagcccgtcggaagcgacataaggaag
ggcaagaaaacccttatagtcagccacttcttccagcacgcgagtgaggaggacaaggcc
gagttcctgaaggtcttcggcaagtacgccggtgacgctaagggcgatgctctcatccac
gacgagaaagttaaggaggaagtcgccaaagccattgagctcctcaaaaagtacggcagc
atcgactacgccgccaactacgcgaaaaacctggtgaaggaagcgaacgaggccctaaag
atcctccctgagagcgaggcgaggaaagatcttgaactcctcgccgagttcctcgtcgag
agggagttctga
DBGET
integrated database retrieval system
