Thalassococcus sp. S3: CFI11_20115
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Entry
CFI11_20115 CDS
T05844
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03030
DNA replication
thaa03430
Mismatch repair
thaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFI11_20115
03430 Mismatch repair
CFI11_20115
03440 Homologous recombination
CFI11_20115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thaa03032
]
CFI11_20115
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_20115
Enzymes [BR:
thaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFI11_20115
DNA replication proteins [BR:
thaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFI11_20115
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFI11_20115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_30
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
AAA_14
AAA_24
TIP49
AAA_18
SLFN-g3_helicase
Rad17
Glyco_tranf_2_5
PIF1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QBF33497
UniProt:
A0A4P6MQH0
LinkDB
All DBs
Position
4085028..4086845
Genome browser
AA seq
605 aa
AA seq
DB search
MSDPSPEYRVLARKYRPETFADIVGQDAMVRTLKNAFEADRIAQAFVMTGIRGTGKTTTA
RIIAKGMNCIGPDGNGGPTTEPCGVCEHCVAIMEGRHVDVMEMDAASRTGVGDIREIIDS
VHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRC
QRFDLRRIEPEDMIALMQKIAAAEGAAIADDAVALIVRAAEGSARDATSLLDQAISHGAG
ETTATQVRAMLGLADRGRVLDLFDRIMRGDAAGALTELSAQYADGADPMAVLRDLAEITH
WISVVKITPEAAEDPTVSPDERMRGTEMAGKLPMRALTRMWQMLLKALEEVSAAPNAMMA
AEMAIIRLTHVADLPSPEDLVRKLQDMPAGAPGGGPGPVQSTGSPAAGGGRTAQTAATMT
GGGSHARGAGTPAASGGASAGASAGAASPGVALAPEVSSSLARYPTFEHVVELIRANRDV
KLLVEVETGLRLAAYQPGRIEFVPADSAPADLAQKLGARLQSWTGNRWAVSVVNEGGGET
IAEKRDAKDLALKAEAEEHPLVQAVLAQFPKAKITAIRTPEEIAADAETEALPEVEDEWD
PFEDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccctcccccgaatatcgcgttctggcgcgcaaataccggcccgagaccttt
gccgatatcgtcggtcaggacgcgatggtgcgcacgctgaaaaacgcgttcgaggcggac
cggatcgcgcaagcctttgtgatgacgggcatcagggggacgggcaagaccaccacggcg
cggatcatcgccaagggcatgaattgcatcggccccgatggaaacggagggccaacgacg
gagccctgtggggtctgcgagcattgcgtagcgatcatggaaggccgtcatgtcgatgtg
atggagatggacgcggcgtctcgcaccggggtgggggatatccgggagatcatcgacagc
gtgcattaccgagcggcctcggcccggtacaagatctacattatcgacgaagtgcacatg
ctgtcgacctctgccttcaacgcactattgaagacgctggaggaaccgccggcgcatgtg
aaattcatctttgccacgacggagatccgcaaggtgccggtgacggtgctgtcacgctgc
cagcgcttcgatctgcgccggatcgagccggaggacatgatcgcgctgatgcagaagatc
gccgctgccgaaggggccgcgattgccgacgatgcggtggcgctgatcgtgagggcggcg
gaaggctcggcgcgggatgcgacgtccctgctggatcaggcgatctcgcacggcgcgggc
gagacgacggcaacgcaagtccgcgcgatgctggggctggcggaccgggggcgggtgctg
gacctctttgatcggatcatgcggggcgatgcggcgggggcgctgacagaattgtcggcg
caatatgcggacggggcggatccgatggcggtgctccgggatctggcagagatcacgcac
tggatttcagttgtgaagatcacgccggaagcggcggaggatcccacggtctcgcccgac
gagcggatgcgcgggacggagatggccggaaagttgcccatgcgggcgctgacacggatg
tggcagatgctgctgaaagcgctggaggaggtatcggcggcacccaatgcgatgatggcc
gccgagatggcgatcatccggctgacacatgtggccgacctgccctcgcccgaggatctg
gtccgcaagctccaggatatgccggcgggtgcgcccggtggcgggccgggccccgtgcaa
agcacgggttcgcctgcggcgggcggggggcgcaccgcccagaccgcagcgactatgact
ggtggagggagccacgcgcggggcgcgggcacgcctgcggcgagcgggggggcctcggct
ggcgcctcggccggggcggcaagccccggggtcgcgctggcgccggaggtgtcgtcgagc
cttgcaaggtatccgacatttgaacatgtggtggagctgatccgggcgaaccgggatgtg
aagctgctggtggaggttgagactgggctgaggctcgcggcctaccagccggggcggatc
gagttcgtgccggcagacagcgcgcccgcggatctggcccagaagctgggcgcacggctg
caaagctggacgggcaatcgctgggcggtgagcgtcgtgaacgagggcggcggggagact
atcgcggagaagcgcgacgcgaaggacctcgccctgaaggcggaagcggaggagcaccca
ctggtgcaggccgtgctggcgcagtttcccaaggcgaagatcaccgccatccgcacgccg
gaagagattgccgccgatgccgagaccgaagcactgccggaggtcgaggacgagtgggat
ccgttcgaggatgactga
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