Thalassococcus sp. S3: CFI11_24030
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Entry
CFI11_24030 CDS
T05844
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa00521
Streptomycin biosynthesis
thaa00523
Polyketide sugar unit biosynthesis
thaa00525
Acarbose and validamycin biosynthesis
thaa00541
O-Antigen nucleotide sugar biosynthesis
thaa01055
Biosynthesis of vancomycin group antibiotics
thaa01100
Metabolic pathways
thaa01110
Biosynthesis of secondary metabolites
thaa01250
Biosynthesis of nucleotide sugars
Module
thaa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CFI11_24030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CFI11_24030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CFI11_24030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CFI11_24030 (rfbB)
00525 Acarbose and validamycin biosynthesis
CFI11_24030 (rfbB)
Enzymes [BR:
thaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CFI11_24030 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
NAD_binding_10
adh_short_C2
NmrA
Motif
Other DBs
NCBI-ProteinID:
QBF34258
UniProt:
A0A4P6MLA4
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Position
pS3B:28070..29119
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AA seq
349 aa
AA seq
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MKLLVTGGAGFIGSAVVRQAIAAGHDVINLDALTYAACLENVAGVADHPRYHFERADIRD
RAALDRILAQHRPDAVMHLAAESHVDRSIDGPGTFIETNVLGTFHLLEAARAYWTGQGRP
GAFRFHHISTDEVFGSLGPDPKTDGQFTESTPYDPRSPYSASKAGSDHLVRAWHETYGLP
VVLTNCSNNYGPYHFPEKLIPVVILNAISGQPIPVYGVGENVRDWLYVEDHADALLTVIG
RGQVGRSYNIGGENEVRNIDLVRMICAILDRVRPQDRPYADQIAFVTDRPGHDLRYAIEP
TRIREELGWRPSVTLQDGLERTVTWYLANEDWWQPLLNRQGVGQRLGTG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctggtgaccggaggggcggggttcatcggatcggccgtggtccgccaggcc
attgccgcgggccatgacgtgatcaacctcgatgcgctgacctatgcggcctgtctggaa
aacgtggccggcgtggcggatcatccgcgatatcatttcgaaagggccgatatccgggac
cgggccgctctggaccggatcctggcgcagcaccggcccgatgcggtgatgcatctggcg
gcggaatcccatgtggaccgctccatagacgggcccggcaccttcatcgaaaccaacgtg
ctgggcaccttccatctgctcgaagccgcgcgggcctattggacggggcagggccggccc
ggggcgttccgcttccatcacatctccaccgacgaggtcttcggctccctgggccccgat
cccaagacggacgggcaattcaccgagagcacgccatatgatccacgctctccctattcg
gcatcgaaggccgggtcggatcatctggtgcgggcctggcacgaaacctacggcctgccc
gtcgtgctgaccaattgctcgaacaattacggcccctatcactttcctgaaaagctgatc
cccgtggtgatcctgaatgcgatttccggtcagccgatcccggtctatggcgtgggagag
aatgtgcgcgactggctttatgtcgaagatcacgccgacgcgctgctgaccgtgatcggc
cgggggcaggtggggcgcagctacaatatcggcggtgaaaacgaggtgcgcaatatcgac
ctggtgcggatgatctgcgcgatcctcgaccgggtgcgcccgcaagaccggccctatgcc
gaccagatcgcattcgtcaccgaccgccccggccacgatctgcgatacgcgattgagccc
acccgcatccgggaggagctgggctggcggccttcggtcaccctgcaggacgggcttgag
cggaccgtgacctggtatctggccaacgaggattggtggcagccgcttctgaaccggcag
ggcgtgggccagcgtctgggcacgggctga
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