Thalassospira marina: CSC3H3_16925
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Entry
CSC3H3_16925 CDS
T05224
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
thac
Thalassospira marina
Pathway
thac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSC3H3_16925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_16925
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSC3H3_16925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AUG54216
LinkDB
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Position
complement(3706937..3708853)
Genome browser
AA seq
638 aa
AA seq
DB search
MTSPATPSSTPRDIDLSLDDLHDGKAGRGVAAIKHALKTMPGSPGVYRMIDEKDRVLYVG
KAKNLKKRVTSYTHIARLPLRIARMVAQAVRMEIITTHTEAEALLLESNLIKKLKPRYNI
LLRDDKSFPYILITEDHGYPRIVKHRGARAKDGSCFGPFASAWAVNNTINHLQRAFLLRS
CTDAVFSNRSRPCLLYQIKRCSGPCVDRISKPEYDGLVDICRDFLSGRSKAILKQLEASM
LDASEQMEFEKAAMYRDRIRALSQIQSHQDINLEGLEEADVISLHHEGGQSCVQVFFFRS
GSNYGNRSYFPRHEQSAEIPEILSAFVGQFYANKPAPRQVLLSHEIEGQKLVEEALAINN
GHKVELLVPQRGGKRKLVEHALTNAREALGRRMAESASQRKLLDGLADKLDLDSPPERIE
VYDNSHIQGTNMVGGMIVAGPEGFMKNAYRKFNIKGDIAPGDDFAMMREVLTRRFARAQK
EDPDRENGSWPDLCLIDGGLGQLGVAMQVLEDQGIDDVMLVGVAKGVDRNAGKEVLHIPG
KEPVRLDQKDPVLYFIQRLRDEAHRWAIGTHRAKRSKQIGKSVLDAVPGIGGARKKALLH
HFGSARGVADAGLADLEAVDGISAGIAKKIYDHFHGDT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccggcaacgccatcttccacaccgcgcgatattgacctgtcgctcgacgat
cttcatgacggaaaagccggtcgcggggtggcagccatcaaacatgcgttaaagaccatg
ccagggtctccgggcgtctatcgcatgatcgacgaaaaggatcgggtcctttatgtcggc
aaggccaagaacctgaaaaaacgggtgaccagctatacccatattgcccgtctgcccctg
cgtattgcccgcatggtggcgcaagcggtgcgcatggaaatcatcaccacccacaccgaa
gccgaagccctgctgcttgagtcaaacctgatcaagaagcttaagccgcgctacaacatc
ctgctgcgcgatgacaaaagctttccctatatcctgatcaccgaggatcacggttatccg
cgtattgtgaaacatcgcggggcgcgggcaaaggatggcagctgttttgggccttttgcc
tcggcctgggcggtgaacaacaccatcaatcatttgcagcgggcctttttgctgcgttcc
tgcaccgatgctgttttttccaaccgctcgcgtccgtgtctgctgtatcaaatcaaacgc
tgttccggcccgtgtgtggaccgcatctccaaacccgaatatgacgggctggttgatatc
tgccgtgatttcctgtcggggcgcagcaaggccatcctcaagcagctcgaagccagcatg
cttgatgcctccgaacagatggaatttgaaaaggcagcgatgtatcgcgaccgtattcgc
gcgctgtcgcaaattcagtcgcatcaggacatcaaccttgaggggctggaagaagccgac
gtcatttccctgcatcatgaaggcgggcaaagctgtgtgcaggtattctttttccgcagc
ggctcgaactatggcaaccggtcctattttccaaggcacgaacaatccgccgaaataccg
gaaattctatcggcctttgtcgggcagttttatgccaataaacccgccccgcgccaggtg
ctgttaagccacgaaatcgaaggccagaaactggttgaagaagccctggccatcaataac
ggccacaaggtggaattgctggtgccccagcgcggcggcaagcgcaagctggtcgaacat
gccctgaccaacgcacgcgaagcattgggtcgccgcatggccgaaagcgcatcccagcgc
aagctgctggatggcctggccgacaagctggaccttgatagtccgccagaacgcattgaa
gtttacgataacagccatattcaggggacgaatatggtcggtggcatgattgtggccggg
ccggaaggctttatgaaaaatgcctatcgcaaattcaacatcaagggcgatatcgccccg
ggcgatgactttgccatgatgcgcgaggtgctgacccgccgctttgcccgtgcgcaaaag
gaagaccccgatcgtgaaaatggcagttggccggacctgtgcctgatcgacggtggtttg
ggtcaacttggtgtcgcgatgcaggtgctggaagatcagggcattgatgatgtgatgctg
gttggtgtcgccaagggggtggaccgaaatgcgggcaaggaagtgctgcatatccccggc
aaggaacccgtgcgccttgatcagaaggacccggttctttatttcattcagcgcctgcgc
gatgaggcccatcgctgggccattggtacgcaccgcgccaaacggtcaaaacagatcggc
aaaagcgtgcttgatgccgtgccgggcattggtggcgcacgcaaaaaggcgttgctgcat
cattttggttccgcccgtggcgtcgccgatgccggccttgccgatctggaagcggtcgat
ggcatcagtgcgggtatcgccaaaaagatctatgaccatttccatggtgatacttaa
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