Thalassotalea sp. PS06: FNC98_01490
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Entry
FNC98_01490 CDS
T06100
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thap
Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thap03016
]
FNC98_01490 (thpR)
Enzymes [BR:
thap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FNC98_01490 (thpR)
Transfer RNA biogenesis [BR:
thap03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FNC98_01490 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QDP00134
UniProt:
A0A516H8N1
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All DBs
Position
complement(332986..333582)
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AA seq
198 aa
AA seq
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MNTSNQSKVEAAKLQSKRIFFALALTAREKESIADWRSQHLTDLKKPVAKNNFHLTLRYI
GNCQMGDITNLKQAATKITCPEFKFSLDTLGHFKKPRVLYLGVNQVPNRLLHLAKSVNAM
VDDTLKFKSNSATDRFTPHVTIARKVSAAINVSDLFDNKFDIKIEARKFALFESVSTVNG
VVYTELMSWPLSELYQSN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccagtaaccaatcgaaagtagaagcagccaagttacagagcaaacggatattc
tttgccctggctttgacggctcgggaaaaagagagcattgccgactggcgatcgcaacat
ttaactgatctaaaaaagccggtggcgaagaacaactttcatcttaccttacgttatatt
ggcaactgccaaatgggtgacatcaccaatctaaaacaagctgcaactaagattacctgt
cccgagttcaagttttcactagacacacttggccattttaaaaaaccaagggtgctgtat
ttaggcgtaaatcaggtgccaaaccggctactgcatctggccaaatccgtgaatgcgatg
gttgacgataccttgaagttcaaaagcaactcagctactgatcgatttactcctcatgtc
accattgcccgcaaagtctctgctgcaattaatgtttcagacctattcgacaataagttc
gacattaagatagaggcaaggaaatttgccctgtttgagtcagtgtcgacagtgaacggt
gtagtctacactgaattgatgtcctggcctttgagcgagttatatcaatcaaactaa
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