Thalassotalea sp. PS06: FNC98_07190
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Entry
FNC98_07190 CDS
T06100
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03030
DNA replication
thap03430
Mismatch repair
thap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNC98_07190 (holB)
03430 Mismatch repair
FNC98_07190 (holB)
03440 Homologous recombination
FNC98_07190 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thap03032
]
FNC98_07190 (holB)
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_07190 (holB)
Enzymes [BR:
thap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNC98_07190 (holB)
DNA replication proteins [BR:
thap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNC98_07190 (holB)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNC98_07190 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
QDP01140
UniProt:
A0A516HBJ1
LinkDB
All DBs
Position
1624395..1625360
Genome browser
AA seq
321 aa
AA seq
DB search
MIEQSFSQKPWLNDIAGQLGQLLEQQRLPHGILFHGHPGSGTRDIGYWLSRQLLCTENGL
WGPACGRCKSCSLLRAGNHPDLVMIESDKAHIGVDSVRKATRFLVNKAQLGQAKVVIIEQ
AEQMTEAAANALLKTLEEPTPFSFLFLISHDSDRLLPTIQSRCTRFDIRPPIGQGLKQSL
GNSGLIDDYSNMSHLAQLQDADIEAEFVDFESLLTQWLQNSSDSEALALQLIEQPLALSW
LTQHLTSAMRSSYRWHGIRKSPVIDALSQFEPQQLHTSIQLINTINQQLKQLPQANKKFM
IESLVIDLVALIGNNAEKRPH
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcaatccttttcgcaaaaaccgtggctaaatgacattgccggacaacttggt
cagttgttagagcaacaacgattaccgcacggcattttattccatggacatcctggcagt
ggtaccagagatatcggctattggttatctcgtcaacttctgtgtaccgagaatgggttg
tggggaccggcgtgtggccggtgcaaatcctgctctttattaagggctggaaatcatcct
gatttagtgatgattgaatctgataaagcccatattggtgttgatagcgttcgtaaggct
acacgatttctggtcaacaaggcgcagcttggtcaggcaaaagtagtcatcatcgagcag
gcggaacaaatgactgaggcggctgctaatgcgttgttgaaaactctggaagaacccacg
ccatttagttttctattcctgataagccacgatagcgatcgactgttaccaaccatacag
tcaaggtgcacccgctttgatatccgtccaccaatcggacaagggttaaagcaaagtctt
ggtaattccgggttaatcgacgattacagcaatatgagtcatctggcgcaattacaagac
gctgacattgaagctgagtttgtagattttgagtcattactgacacagtggttacaaaac
tcctcggacagcgaagcacttgctctgcagttgattgaacagcccttagcattgtcctgg
ttgacgcaacatctaacctcagcaatgcgcagctcttatcggtggcatgggatacgaaaa
tctccggttattgacgcattaagtcaatttgaaccacaacaattacatacttcgatacag
ctaattaatacgattaatcaacagcttaaacaactgccacaagcaaataaaaagtttatg
attgaatctttggttattgatttagttgcattgatcggtaacaatgcagaaaaacgtccg
cattaa
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