Thalassotalea sp. PS06: FNC98_09975
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Entry
FNC98_09975 CDS
T06100
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thap
Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_09975
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNC98_09975
Archaeal homologous recombinant proteins
FNC98_09975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QDP01633
UniProt:
A0A516HCZ0
LinkDB
All DBs
Position
complement(2244087..2247167)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKFLTLSVQAFGPFADKQVIDFQKLGDAPLFLIDGPTGAGKSSILHAICFALYGETTDEA
RKDFAVRSDNANDDILTQVELTFTIRDKRYRITRTPTQLRPAKRGDGFTEEKASAHFCQF
LDDGTEVTLVAKKKKDADDMIREIIGLTVDQFRQVMVLPQGKFRELLLAKSDARQSILST
LFQTQIYQKIEQILKDKAALIKGDYEQLQEMINQALQEAEVQEISQLKSREEQQIQKLAE
LTASKQQLETQRQQAIVAYQEGKKLAEDFSEHTRLQHSQAEHLQRQQEMALQANKLQLSE
QAARIEPGFKVLQAQQADIKQLQTQITETEQLEAQTVENLQRSEQQLQAAQQQHQQRQPL
LDQQQKLVIFQETLAGFDVIKQECQQKSAAEQSARQNIEQAKAKIEEYSGRVKKGEALIQ
SLQLNVDKMPAAIEHQAMLEQQITASRQLQQLIDKQQSLNQEFGQRQTLVKQSQVLLETE
NKTLMTIEFQWHSSQAAILAAQLNPGDACPVCGSKEHPAPARLDAASGSQVVNKSMIDEQ
RARRDEKQQGLQNAQVDLAKIEQELNVCQAQQQQLIDSQKQTQGNGILPLEELEQTLAQH
RQIINGLKQDQQQLIKAGEKLRAMQTELQRLMANLQELEQALPALAADSATAAMKLADAE
KGLPEQYRDKSILDKAVNDNQQSLAKLDSQLAEAQQNFQKVSQDLSAIGSKKTTQLQHAE
QMQQKLQQLETQWQEQLTASHFDDQNAFLAACIDEFSLRRLQQDVSEYQQRAKTLADNLS
LLAERLKEKSAPDLSALQANLDNTDHQYQIHEKEVNQASIAVANSTNILKRIAEYQSRQE
QHREDYEVIGTLANAASGKGKVRVSLERFVLADILDNVLSIASQRLHIMSKGQYRLVRQA
EAQQKRNVTAGLDLAVDDAHTGKVRPVATLSGGESFMASLALALALSEVVQQRSGGIELD
TLFIDEGFGSLDHESLQLAINTLIDLQSTGRTIGVISHVNELKEQMAQRIDVRNDGGGSK
ISLSNM
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttaaccctttcggtgcaggcatttggtccatttgccgataaacaggtgatt
gattttcaaaagcttggtgacgcgccactgtttttaattgatggtccaaccggggcaggt
aagtcctcaatcttgcacgctatttgttttgcattgtacggtgaaaccacggatgaagcg
cgtaaggactttgcggtacgctcggataacgctaatgatgacatacttactcaggtggaa
ctgaccttcaccattcgtgataagcgttatcgaattactcgtacaccaacgcaattgcgt
cccgccaagcgtggtgatggctttaccgaagaaaaagctagcgctcatttttgtcagttc
ctggatgatggcactgaagtcacgctggtcgcgaaaaagaaaaaagatgccgacgacatg
atccgcgaaattatcggtttaaccgtcgaccaatttcgtcaggtcatggtattgccacag
ggcaaattccgagaattactgttggccaaatcggatgctcggcaatcgattctatcaacc
ttattccaaactcagatttatcaaaaaatcgaacaaattctcaaagacaaagcagcctta
atcaaaggggattatgaacagctgcaggagatgattaatcaggcgttgcaggaagccgag
gttcaggaaatatctcagcttaagagtcgagaagaacagcagatacaaaaattagccgag
ttaactgcaagcaaacagcaactggaaacacagcgccaacaagccattgtcgcatatcag
gaagggaaaaaactggccgaggatttttctgagcatacccgattacaacactctcaggcg
gaacatctgcagcgacagcaggagatggcgctgcaggccaataagttgcaactctctgag
caagcggctcgaattgaaccaggctttaaggtcttgcaggctcagcaagcagatatcaaa
caactgcaaacgcagattaccgagactgagcagctagaagcgcaaacggttgaaaatttg
cagcgctcggaacagcagttacaagccgcccagcaacagcatcagcaacgccagcccttg
ttagatcaacagcaaaagctggtgattttccaggaaaccctggcgggctttgatgtcatc
aagcaggaatgtcagcaaaaatcagcagcagagcaaagcgccagacagaacatcgaacaa
gccaaggctaaaattgaagaatactcaggccgagtgaaaaaaggtgaagcgttaattcag
tctctgcaactcaatgtcgataaaatgccggcggcgatagaacaccaggcaatgcttgag
caacaaatcaccgcgagtcgacagttacagcagttaatcgacaagcagcagtccctgaat
caagagtttggccaacgccaaaccctggtaaaacaatctcaagtccttcttgagacagaa
aataaaaccttgatgaccattgagtttcaatggcacagctcgcaggcggcgattcttgct
gcgcaacttaatccgggcgatgcctgcccggtttgtggctccaaagaacatccggcaccg
gcgcgattagatgccgcgtctggtagtcaggttgtcaataaatcgatgatcgatgaacag
cgtgcccgccgtgatgaaaaacagcaagggctgcaaaacgctcaagtagatttggcaaaa
attgaacaggagctaaacgtttgtcaggcgcagcaacaacagctcattgattcacaaaag
cagacgcagggtaacgggattttacctctagaggaattagaacaaacgctggcgcagcat
cgtcaaataatcaatggccttaaacaagatcagcaacaactgatcaaggctggcgaaaag
ttgcgggcgatgcagacagaattgcagcggttaatggccaatctacaggaacttgaacaa
gcattgccagcgcttgctgccgacagtgcaaccgctgcgatgaaacttgcggatgcggaa
aaaggcttaccagaacaatatcgcgacaaatcgatattggacaaagcggttaatgataac
caacaatcattagcgaaattagatagtcagcttgcggaagctcagcaaaatttccagaaa
gtctctcaggatttaagtgcaatcggcagtaaaaaaacaacccaactgcaacatgctgag
caaatgcagcaaaaactgcagcaactggaaacgcaatggcaggaacagttaaccgcgagt
cattttgacgatcaaaatgccttcctggcagcgtgtattgatgagtttagtctgcgtcga
ttacagcaagatgtgagtgaatatcagcaaagagcgaaaacgctggcggataacttaagc
ttgctggccgagcgattaaaggaaaaatcggctcccgatttatcggcgttgcaggcaaac
ctggataataccgatcaccaatatcagatccacgaaaaggaagtgaatcaggcatcaatt
gccgtcgctaattcgaccaatattctaaaacgaattgctgaatatcagtctcgacaggaa
cagcatcgagaggattatgaagtgataggcacgttggcaaatgcggccagcggtaaaggc
aaagttagagtctctctggagcgttttgtgctggcggatattcttgataacgtgctatca
attgccagccagcgtttgcatattatgagcaaaggtcagtaccgattggtgcgacaggct
gaagcgcagcaaaagcgtaatgttactgctgggttagatttagccgttgatgatgcgcac
acaggcaaagttcgcccggtggcgactttatccggtggtgaatctttcatggcgtctttg
gctttagctcttgcgctctcagaagttgtacagcaacgctccggcggtatcgaattggat
accttgtttatcgatgaagggttcggcagtttagatcatgagtctttgcaattggcgatt
aataccttaatcgatttacagtccaccggccgcaccataggggttatctcccatgtaaat
gagctcaaagagcagatggcgcagcgtattgatgtacgcaatgatggtggtggcagcaag
atttctttgtcaaatatgtaa
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