Thalassotalea sp. PS06: FNC98_10920
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Entry
FNC98_10920 CDS
T06100
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
thap
Thalassotalea sp. PS06
Pathway
thap02020
Two-component system
thap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FNC98_10920
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FNC98_10920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thap02022
]
FNC98_10920
02035 Bacterial motility proteins [BR:
thap02035
]
FNC98_10920
Two-component system [BR:
thap02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
FNC98_10920
Bacterial motility proteins [BR:
thap02035
]
Flagellar system
Flagellar assembly proteins
Others
FNC98_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
Mg_chelatase
HTH_28
MerR
HTH_20
HTH_23
AAA
AAA_16
AAA_3
HTH_50
HTH_24
AAA_7
HTH_Tnp_ISL3
AAA_19
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QDP01807
UniProt:
A0A516HDH6
LinkDB
All DBs
Position
complement(2461970..2463310)
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AA seq
446 aa
AA seq
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MTQNLVLVVEDDPGLREAVVDTLMLSDYLCIEADSGEAALLMLKQHKVDIVVTDVQMGGM
SGLDLLRSIKLNYPELPVLIMTAYATIDDAVQAMKDGACNYMAKPFAPEVLVNLISQYLP
VHQQSKDQPVAEDDKSVKLLSLARKVAASDASVMVLGPSGSGKEVLSQYIHNQSGRSEQP
FIAINCAAIPENMLEATLFGYEKGAFTGAVNACPGKFEQAQNGTILLDEITEMDLALQAK
ILRVIQERQVERLGSRKTISLDVRVIATSNRDLKQAVSEGVFREDLYYRLNVFPLTWPPL
FERPNDIIPLTEHLLAKYHPQEPVEISDSARHKLLGYNWPGNVRELDNIVQRALILNQDN
IIRADDLMIEDLSVNDSFEAGLIANDLHQAPKADLESGLKQQEFQIILDALETCNGSRKD
VAERLGVSARTLRYKLAKMREHGIEF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaatctggtgttagtggtagaagatgatcccggcctgagagaggcggttgtt
gataccctaatgttgtccgattatctctgcattgaagccgatagtggtgaagctgcactg
cttatgctgaagcagcataaagtggatattgtggttacagatgttcagatgggcggcatg
tctggattagacttattgcgcagcataaaattaaattatcccgaactccctgtcctcata
atgaccgcatatgccaccattgatgatgcggtgcaggctatgaaggatggcgcctgcaac
tatatggccaaacctttcgcgccagaggtattggttaatttgattagccagtatctgccg
gttcaccaacaatcaaaagatcaaccggtggctgaagatgataaaagtgtaaaactgtta
tctctggcaagaaaagtcgcggcttctgacgcttcggttatggtattgggacccagtggc
tcaggtaaagaagtactatcacaatatattcataatcagtctggccgttctgaacagcct
ttcatcgccattaattgtgccgcgatcccagagaatatgcttgaagctaccttatttggc
tatgaaaaaggtgccttcactggggcggttaacgcctgcccgggtaagtttgaacaggcg
caaaatggtaccattttgcttgatgaaattaccgagatggatttagctctgcaggcgaag
attcttcgggtaattcaggagcgccaggtagagcgtctcggtagcaggaaaaccattagc
ctcgatgttcgtgttattgccacctcaaaccgggatttaaaacaagcggtgagtgaaggg
gtttttcgcgaggatttatattaccgactcaatgtttttcctctgacgtggccacctcta
ttcgagcgccccaacgatatcattcctttaacggaacacctgttagcgaaatatcatccc
caggagccggtcgaaatctctgattcggctcgacataagttactcgggtacaattggccc
gggaatgtcagggaactggataatatcgtccagcgagccttgattttaaatcaggacaat
atcatcagagccgatgatttgatgatcgaagatctgagtgtcaatgactccttcgaggcc
ggattaatcgccaatgatctgcatcaggcaccgaaagcggatttagaatccgggcttaaa
caacaggaatttcaaataatccttgatgctctggaaacctgtaatggttctcgcaaagat
gtcgctgagcgcttgggtgtcagtgctcgtaccttacgttataagctggcgaaaatgcgt
gagcatggtattgagttctaa
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